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Name : TCCBUS3UF1_17180 (TCCBUS3UF1_17180) Accession : YP_005654833.1 Strain : Thermus sp. CCB_US3_UF1 Genome accession: NC_017278 Putative virulence/resistance : Unknown Product : Glycolate oxidase subunit GlcD Function : - COG functional category : - COG ID : - EC number : - Position : 1713436 - 1714821 bp Length : 1386 bp Strand : + Note : similar to glycolate oxidase subunit GlcD PRK11230; similar to Glycolate oxidase subunit GlcD of Rhodopirellula baltica UniRef RepID=Q7UJ97_RHOBA DNA sequence : ATGGGATTTCTGGAGGAGCTAAGGGCCCTTTTCCCCCCGGGCAGGGTTCTCACCCAGGGGGCGGCCCTGGCCCCCTATGA GTCCGACGCCCTCACCGCCTACCGCCAGCGCCCCCTGGCGGTGGTCCTCCCCGAAAGGAAGGAGGAGGTGGTCCAGACCG TGCGGCTTTGCCACCGCTACGGGGTCCCCTTCGTGGCCCGGGGAAGCGGCACCAGCCTTTCGGGGGGGTCCCTGCCCGTG GAGGGGGGGATCGTCCTGGCCCTCAACCGCATGAACCGCATCCTGCGCCTGGACCCCCAGGCCATGGTGGCCGTGGTGGA ACCCGGGGTGGTGAACCTGGAGGTCTCCCGCCAGGCCGCCCCCTTCGGCCTCTACTACGCCCCCGACCCTTCCAGCCAGC CCGTCTCCACCCTAGGGGGGAACGTGGCCTTCAACTCCGGGGGGGCCCACTGCCTGAAGTACGGCATGACCGCCAACCAC GTGTTGGGCCTCGAGGTGGTCACCCCCGAAGGGGAGGTGGTGCGGCTGGGCGGGGAAGGCCTGGAGGGGGTGGGGCCCGA CCTCCACGGCTTCTTTGTGGGCACGGAGGGGCTTTTGGGGGTGGCGGTGGAGATCACCTTAAGGCTCCTCCCCAAGCCCG AGGCCTACCACACCCTTCTCGCCGCCTACGGGAGCCTGGAAGGGGCCGGGGAGGCGGTGAGCCTGGTCATCCGGCGGGGC CTCCTCCCGGGGGCCATGGAGATCATGGACCGCCTAGCCATTGAGGCGGCGGAGGCCGCGGTCCAGGCCGGCTACCCCAA GGCGGAAGCCCTCCTCATCGTGGAACTGGAAGGCCCTAAGGAGGAGGTGGCCGAGGAGGCCCTGGTCCTGGAGGAGGTGA TCCGGGAAAGCGGGGCCCTGGAGGTGCGGGTGGCCGGAAGCGAGGCCGAGCGCCAAGCCATCTGGAAGGGCAGGAAGGCA GCCTTCAGCGCCGTGGGCCGCCTCTCCCCCGACTACCTGGTCCAGGACGGGGTGGTGCCCCGAAGCCGCCTGGCGGAGGC CTTGAGGGAGATCGGCCGGCTCTCCCAGGCCTACGGCCTGCGGGTGGCCAACGTCTTCCACGCCGGGGATGGCAACCTCC ACCCCCTGGTCCTCTACGACGGCAAGAAACCCGGGGAGCTGGAAAGGGCCGAGGCCCTGGCCGGGGAGATCCTGCGGCTT TGCGTGCGGCTTGGGGGCTCCCTTACCGGGGAGCACGGCATCGGGGTGGAGAAGAAGGGGTACATGCCCGAGATGTTCGC TCCGGAGGACCTCCTGGCCATGGAAGGGGTCAAGAAGGCCCTGGACCCCAAGGGCCTGGCCAACCGGGGCAAGGTCTTGC CGGAGGTGGCCCGTGCCGGAGGTTAG Protein sequence : MGFLEELRALFPPGRVLTQGAALAPYESDALTAYRQRPLAVVLPERKEEVVQTVRLCHRYGVPFVARGSGTSLSGGSLPV EGGIVLALNRMNRILRLDPQAMVAVVEPGVVNLEVSRQAAPFGLYYAPDPSSQPVSTLGGNVAFNSGGAHCLKYGMTANH VLGLEVVTPEGEVVRLGGEGLEGVGPDLHGFFVGTEGLLGVAVEITLRLLPKPEAYHTLLAAYGSLEGAGEAVSLVIRRG LLPGAMEIMDRLAIEAAEAAVQAGYPKAEALLIVELEGPKEEVAEEALVLEEVIRESGALEVRVAGSEAERQAIWKGRKA AFSAVGRLSPDYLVQDGVVPRSRLAEALREIGRLSQAYGLRVANVFHAGDGNLHPLVLYDGKKPGELERAEALAGEILRL CVRLGGSLTGEHGIGVEKKGYMPEMFAPEDLLAMEGVKKALDPKGLANRGKVLPEVARAGG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 2e-85 | 51 |
