Gene Information

Name : TCCBUS3UF1_18220 (TCCBUS3UF1_18220)
Accession : YP_005654935.1
Strain : Thermus sp. CCB_US3_UF1
Genome accession: NC_017278
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1828464 - 1831028 bp
Length : 2565 bp
Strand : +
Note : similar to protein disaggregation chaperone PRK10865; similar to Chaperone protein ClpB of Bacteria UniRef RepID=CLPB_DEIRA

DNA sequence :
ATGCAGCTGGACCGCTGGACGCAAACCGCCCGCGAAGCCTTGGCCCAGGCTCAGGTCCTGGCCCGGGGGATGAAGCACCA
GGCCATAGACCTGCCCCACCTGTGGGCGGTCCTTCTGCGGGACCCCGGGGGCCTGGCCTGGCGCCTTTTGGAGAAGGCGG
GGGCAGACCCCAAGGCCCTGAAGGAGGAGGCGGAGCGGGAGCTGGCCCGGCTGCCCCGGGTGGAAGGGGCGGAAGGGGGG
CAGTACCTTACCCCCCGCCTCTCCGGGGTCTTCGGGCGGGCCGAGGCCCTGATGGGGGAACTCAAGGACCGGTTTCTCGC
CCTGGACACCCTGGTCCTGGCCCTGGCCGAGGCCACCCCGGGGCTTCCCGGGCCGGAAGCCTTCAAGGCCGCCCTGCGGG
AACTTAGGGGAGGGAAAACTGTGGACACGGAACATGCCGAGAACACCTACCGAGCCCTGGAGCAGTATGGCCTGGACCTC
ACGTCCCTGGCGGCCCAGGGCAAGCTGGATCCCGTCATTGGCCGGGACGAGGAGATCCGGCGGGTCATCCAGATCCTCCT
GCGCCGCACCAAGAACAACCCCGTGCTCATCGGCGAGCCCGGGGTGGGCAAGACGGCCATCGTGGAGGGCCTGGCCCAGC
GCATCGTCAAGGGGGATGTGCCGGAGGGGCTCAAGGGCAAGCGGATCATCTCCTTGCAGATGGGCTCCCTCCTGGCCGGG
GCCAAGTACCGGGGAGAGTTTGAGGAGCGCCTGAAGGCCGTGATCCAGGAGGTGGTGGAAAGCCAAGGGGAGATCATCCT
GTTCATTGACGAGCTCCACACCGTGGTGGGAGCGGGGAAGGCCGAGGGGGCGGTGGACGCCGGCAACATGCTCAAGCCCG
CCCTGGCCCGGGGGGAGCTCAGGCTCATCGGGGCCACCACCCTGGACGAGTACCGGGAGATCGAGAAGGACCCGGCCCTA
GAGCGGCGCTTCCAGCCGGTCTACGTGGACGAGCCCAGCGTGGAGGACACCATCTCCATCCTGCGGGGCATCAAGGAGAA
GTACGAGGTCCACCACGGGGTGCGCATCTCCGACCCGGCCATCGTGGCCGCGGCGGTCCTCTCCCACCGCTACATCACGG
AAAGGCGCCTCCCCGACAAGGCCATTGACCTGGTGGACGAGGCCGCGGCCCGGCTGCGCATGGCCCTGGAAAGCGCCCCC
GAGGAGATCGACGCCCTGGAGAGGAAAAAGCTCCAGCTGGAGATCGAGCGGGAGGCCCTCAAAAAGGAAAAAGACCCCGA
CTCCCTGGAGCGCCTCAAGGCCATTGAGGAGGAGATCGCCCACCTCACCCAGGAGATCGCCAAGCTCCGGGCGGAATGGG
AGGCGGAGCGGGAGGTTTTGCGGAAGCTCAGGGAAGCCCAGCACCGCTTGGACGAGGTGCGGCGGCAGATTGAGCTGGCC
GAGCGCCAGTACGACCTGAACCGGGCCGCCGAGCTCCGCTACGGGGAGCTTCCCCGCCTCGAGGCCGAGGTGGAAGCCCT
TTCGGAAAAGCTCAAGGGGGCCCGCTTTGTCCGCTTGGAGGTCACGGAGGAGGACATCGCCGAGATCGTTTCCCGCTGGA
CAGGGATCCCCGTGGCCAGGCTCCTGGAAGGGGAAAGGGAGAAGCTCTTGCGGCTAGAGGAGGAGCTGCACAGGCGGGTG
GTGGGCCAGGAGGAGGCCATCAGGGCCGTGGCCGACGCCATCCGCAGGGCCCGGGCCGGCCTCAAAGACCCTGGCCGCCC
CATCGGCAGCTTCCTCTTCCTGGGCCCCACGGGGGTGGGCAAGACGGAGCTGGCCAAGACCCTGGCCGCCACCCTCTTTG
ACACCGAGGAGGCCATGGTGCGCATAGACATGACGGAGTACATGGAGAAGCACGCCGTGAGCCGCCTCATCGGGGCCCCG
CCCGGCTACGTGGGCTACGAGGAAGGGGGGCAGCTCACGGAGGCCGTGCGGCGGCGGCCCTACACCGTGATCCTCTTTGA
CGAGATCGAGAAGGCCCACCCCGACGTCTTCAACCTCCTCCTGCAGATCCTGGACGATGGCCGCCTCACCGACTCCCACG
GGCGCACCGTGGACTTCCGCAACACCGTGATCATCCTCACCTCCAACCTGGGAAGCCCCATCATCCTGGAGGGCATCCAG
AAGGGCTGGCCCTACGAGCGGATCCGGGAGGAGGTCTTCGCCATCCTGCAAAGGCACTTCCGCCCCGAGTTCCTGAACCG
CCTGGACGAGATCGTGGTCTTCCGGCCCCTTACCCGGGAGCAGCTCCGCGCCATCGTGGAGATCCAGCTGGCCCAGCTCC
GGGCCCGGCTTGCGGAGAAGCGCATCGCCCTGGAGCTCACCGAGGCGGCCAAGGACTTCTTGGCGGAACGGGGCTTTGAC
CCCGTCTTCGGCGCAAGGCCCCTGAAGCGGGTCATCGGGCGGGAGCTGGAAACCCCCTTGGCCAAAAGGATCCTGGCAGG
GGAGATCGTGGAGGGAAGCCGGGTGGTGGTGGACGCGGGACCCGCGGGCCTCATCTTCCGTAGCGAGGAACGGGTGGAAG
CCTAG

Protein sequence :
MQLDRWTQTAREALAQAQVLARGMKHQAIDLPHLWAVLLRDPGGLAWRLLEKAGADPKALKEEAERELARLPRVEGAEGG
QYLTPRLSGVFGRAEALMGELKDRFLALDTLVLALAEATPGLPGPEAFKAALRELRGGKTVDTEHAENTYRALEQYGLDL
TSLAAQGKLDPVIGRDEEIRRVIQILLRRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKGKRIISLQMGSLLAG
AKYRGEFEERLKAVIQEVVESQGEIILFIDELHTVVGAGKAEGAVDAGNMLKPALARGELRLIGATTLDEYREIEKDPAL
ERRFQPVYVDEPSVEDTISILRGIKEKYEVHHGVRISDPAIVAAAVLSHRYITERRLPDKAIDLVDEAAARLRMALESAP
EEIDALERKKLQLEIEREALKKEKDPDSLERLKAIEEEIAHLTQEIAKLRAEWEAEREVLRKLREAQHRLDEVRRQIELA
ERQYDLNRAAELRYGELPRLEAEVEALSEKLKGARFVRLEVTEEDIAEIVSRWTGIPVARLLEGEREKLLRLEEELHRRV
VGQEEAIRAVADAIRRARAGLKDPGRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMVRIDMTEYMEKHAVSRLIGAP
PGYVGYEEGGQLTEAVRRRPYTVILFDEIEKAHPDVFNLLLQILDDGRLTDSHGRTVDFRNTVIILTSNLGSPIILEGIQ
KGWPYERIREEVFAILQRHFRPEFLNRLDEIVVFRPLTREQLRAIVEIQLAQLRARLAEKRIALELTEAAKDFLAERGFD
PVFGARPLKRVIGRELETPLAKRILAGEIVEGSRVVVDAGPAGLIFRSEERVEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 1e-96 44
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 1e-99 43
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 9e-100 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TCCBUS3UF1_18220 YP_005654935.1 hypothetical protein VFG2084 Protein 1e-101 42
TCCBUS3UF1_18220 YP_005654935.1 hypothetical protein VFG2076 Protein 1e-109 41