Gene Information

Name : rrsA (TCP_125)
Accession : -
Strain : Candidatus Tremblaya princeps PCVAL
Genome accession: NC_017293
Putative virulence/resistance : Unknown
Product : 16S ribosomal RNA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 106844 - 108364 bp
Length : 1521 bp
Strand : -
Note : -

DNA sequence : 
AGATTGAACGCTTGCGGTATGCATAACACATGCAAGTCGTACGGCAGCACGGGCTAAGGCCTGGTGGCGAGTGGCGAACG
GGTGAGTAACGCCCCGGAACGTGCCTTGTAGTGGGGGATAGACTGGCGAAAGTCAGAGTAATACCGCATGAAGCCACGCA
GCATGCGCGGTGAAAGTGGGGGATTCTAGCCTCACGCTACTGGATCGGCCGGGGTCTGATTAGCTAGTTGGCGGGATAAT
AGCCCACCAAGGCTGAGATCAGTAGCTGGTCTGAGAGGACGGTCAGCCACACTGGAACTGAGACACGGTCCAGACTCCTA
CGGGAGGCAGCAGTGGGGAATCTTGGACAATGGGGGGAACCCTGATCCAGCAATGCCGCGTGTGCGAAGAAGGCCTTCGG
GTTGTAAAGCACTTTTGTTCGGAAAGAAGGGGGGCGTGCTAACACCATGCCCTCTTGACGATACCGAAAGAATAAGCACC
GGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTAATCGGAATCACTGGGCGTAAAGGGTGCGCGG
GTGGCTTGCCAAGACCCCTGTAAAATCCTACGGCCCAACCGTAGAGCTGCGGAGGTGACTGGCAAGCTTGAGTATGGCAG
AGGGGGGTAGAATTCCAGGTGTAGCGGTGAAATGCGTAGATATCTGGAGGAATACCGAAGGCGAAGGCAACCCCCTGGGC
CATCACTGACACTGAGGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACCATGTCG
ACTAGTTGTCGGGGGAGCCCTTTTTCCTCGGTGACGAAGCTAACGCATGAAGTCGACCGCCTGAGGAGTACGACCGCAAG
GTTAAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGATGATGTGGATTAATTCGATGCAACGCGAAGAACCTT
ACCTACCCTTGACATGGCGGAGATTCTACCGAGAGGCGGAAGTGCTCGAAAGAGAATCCGTGCACAGGTGCTGCATGGCT
GTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCATAACGAGCGCAACCCCCGTCTATAGTTGCTACCACTGGGCA
CTCTATGGAGACTGCCAGCGATGAGCTAGAGGAGGGAGGGGACGACGTCAAGTCATCATGGCCTTTATGGGTGGGGCTTC
ACACGTCATACAATGGTTGGAGCAAAGGGTCGCCAACTCGAGAGAGGGAGCTAATCCCACAAACCCAGCCCCAGTTCGGA
TTGGAGTCTGCAACTCGACTCCATGAAGTAGGAATCGCTAGTAATCGTGGATCAGCATGCCACGGTGAATACGTTCCCGG
GTCTTGTACACACCGCCCGTCACACCATGGAAGTAGGCCGCATCCGAAGCAGCCTCCCTAACCCTATTGCTGGGAAGGAG
GCTGCGAAGGTGGGGTCTATGACTGGGGTGAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGATTACCTCCTT
A

Protein sequence : 
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
FTT_r07 - 16S ribosomal RNA Not tested FPI DNA e-126 83.8
FTT_r10 - 16S ribosomal RNA Not tested FPI DNA e-126 83.8
FTM_1695 - 16S ribosomal RNA Not tested FPI DNA e-217 82.3
FTM_1085 - 16S ribosomal RNA Not tested FPI DNA e-217 82.3
FTW_2069 - 16S ribosomal RNA Not tested FPI DNA e-217 82.3
FTW_2070 - 16S ribosomal RNA Not tested FPI DNA e-217 82.3