Gene Information

Name : H04402_02126 (H04402_02126)
Accession : YP_005678669.1
Strain : Clostridium botulinum H04402 065
Genome accession: NC_017299
Putative virulence/resistance : Virulence
Product : carbon dioxide concentrating mechanism/carboxysome shell protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2268780 - 2269076 bp
Length : 297 bp
Strand : -
Note : -

DNA sequence :
ATGAGATACTATGGAAATGAGGCTCTAGGCCTTGTGGAAACAATAGGATTAGTTCCTGCACTTGAGGCTGCAGATAAAAT
GCTTAAGGCGGCTAATGTTGAATTAATTTCCTATGAAAATATTGGTTCAACTCTTGTAACTATTATGGTAAAAGGGGATG
TTGGTGCAGTAAAGTCTGCTGTAGAAGCAGGTGCTGAAGCAGCTAGAGCTATCGGTAAATTAACAGCACACAATGTTATG
CCACGTCCTATTAGAGAAGTTGGAGATATTGTTTCAGTACACGATATCGATTCATAA

Protein sequence :
MRYYGNEALGLVETIGLVPALEAADKMLKAANVELISYENIGSTLVTIMVKGDVGAVKSAVEAGAEAARAIGKLTAHNVM
PRPIREVGDIVSVHDIDS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 4e-12 63
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 2e-11 61
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 4e-11 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
H04402_02126 YP_005678669.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1596 Protein 2e-12 63
H04402_02126 YP_005678669.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1597 Protein 1e-11 61
H04402_02126 YP_005678669.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1598 Protein 2e-11 58