|
Name : Clo1313_0296 (Clo1313_0296) Accession : YP_005686838.1 Strain : Clostridium thermocellum DSM 1313 Genome accession: NC_017304 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : - COG ID : - EC number : - Position : 321949 - 322884 bp Length : 936 bp Strand : + Note : PFAM: Transketolase central region; Transketolase domain-containing protein; KEGG: cbt:CLH_3106 transketolase, pyridine binding domain DNA sequence : ATGCAGGAAAAGATTGCGACAAGGGAAGCTTACGGAAAAACTTTGGCGGAGATAGGATCTGATCCGAGAATAGTTGTCAT GGATGCGGATTTGTCAAAGTCAACGAAAACGGAATATTTCAAAAATAAATATCCCGAAAGGTTTTTCAATATGGGTATTG CAGAGGCGAACATGATGGCAGCCGCGGCAGGAATTGCCTCCTGCGGTAAAGTAGTGTTTGCAAGCACTTTCGCGATGTTT GCTTCGGGAAGGGCTTTTGAACAAATTAGAAATTCCATATGCTATTCCAATCTCGATGTAAAAATCGGTGCATCCCACTC CGGACTTACCGTGGGTGAAGACGGAGCTTCCCACCAGACCATTGAGGATATAGCGATTATGAGGGTTATACCCAACATGA CTGTTGTCTGTCCTGCCGATGCCGTTGAGGCAAGACATGCCACAATAGCGGCTTATAAGACGCCGGGACCGTTCTATTTA AGGCTTACAAGGCTTGCGGTACCGGTTATATTCGACGAAAATTACAAGTTTGAGCTTGGCAAGGGAGTTACGATAAGAGA CGGCAACGATGTTGCAATAATTGCCACGGGCCTTATGGTGTCAAAAGCCATTGAAGCGGCGGATATTTTAAAGCGTGAGG GAATTAATGCCAGACTTATCAACATTCATACAATAAAGCCTATTGACAGGGATATAATTATAAAGGCTGCAACTGAAACC GGTGCGATTGTTACGTGTGAAGAACACAGTGTAATCGGAGGACTTGGAAGTGCCGTGGCGGAGGTGCTAGTGGAAACCTG TCCTGTTCCGATGAGAATGGTTGGAGTTATGGACAGGTTCGGAAAGTCCGGTAAACCGGATGAACTTCTCAAAATGTATG GATTGACTGCTGAAAATATAGTGGAAAAAGTAAAAGAAGTCTTGAAAAACAAATAG Protein sequence : MQEKIATREAYGKTLAEIGSDPRIVVMDADLSKSTKTEYFKNKYPERFFNMGIAEANMMAAAAGIASCGKVVFASTFAMF ASGRAFEQIRNSICYSNLDVKIGASHSGLTVGEDGASHQTIEDIAIMRVIPNMTVVCPADAVEARHATIAAYKTPGPFYL RLTRLAVPVIFDENYKFELGKGVTIRDGNDVAIIATGLMVSKAIEAADILKREGINARLINIHTIKPIDRDIIIKAATET GAIVTCEEHSVIGGLGSAVAEVLVETCPVPMRMVGVMDRFGKSGKPDELLKMYGLTAENIVEKVKEVLKNK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96118.1 | transketolase | Not tested | T-PAI | Protein | 1e-37 | 46 |
| unnamed | AAT96230.1 | transketolase | Not tested | T-PAI | Protein | 4e-31 | 45 |
| unnamed | AAT96057.1 | transketolase | Not tested | T-PAI | Protein | 5e-41 | 42 |
| unnamed | AAT96101.1 | transketolase | Not tested | T-PAI | Protein | 5e-41 | 42 |
