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Name : glcD (SM11_chr0431) Accession : YP_005718973.1 Strain : Sinorhizobium meliloti SM11 Genome accession: NC_017325 Putative virulence/resistance : Unknown Product : glycolate oxidase subunit GlcD Function : - COG functional category : - COG ID : - EC number : - Position : 452778 - 454217 bp Length : 1440 bp Strand : + Note : FAD/FMN-containing dehydrogenases DNA sequence : ATGCCGGAGACGATCGGCTTTCTGAAGCCAAGGCAGGCCGTCCTCGATCGTCGGCGGGAAATCGTCGCCGATCTTGCCGA TCTGTTGCCGGAAGGCGGCCTCATCAGCGACGAGCGCGGCCTCAAGCCCTTCGAGACGGATGCGTTTATCGCCTATCGGC GGATGCCGCTCGCGGTCGTTCTTCCCGAGACGACGGAGCACGTGGCCGCGGTGCTCAAATATTGCAGCCGCTACGGCATT CCGATCGTGCCGCGGGGCGCCGGCACCTCGCTCTCCGGCGGCGCCATTCCTCAGGAGGACGCGATCGTCGTCGGTCTGTC GAAGATGTCGCGCACCCTGGATATCGACCTGTTCAACCGCACGGCGACGGTTCAGGCGGGCGTGACCAATCTCAATATTT CCGATGCGGTTTCGGCCGACGGCTTCTTCTATGCCCCGGATCCGAGTTCGCAGCTCGCCTGCACCATAGGCGGGAACATC GGGATGAATTCCGGCGGCGCGCACTGTCTGAAGTACGGGGTTACGACCAACAACCTTCTGGGCGTCAAGATGGTGCTTTT CGACGGCACCGTGATCGAACTCGGCGGCAAGGCGCTCGACGCGCCGGGATACGACCTGCTTGGGCTCGTCTGCGGTTCGG AGGGGCAGCTCGGCATCGTCACGGAAGCGACGGTGCGGCTGATTGCGAAGCCCGAAGGTGCGCGGCCCGTGCTCTTCGGA TTTGCCTCTTCCGAGTCCGCCGGCAGCTGCGTCGCCGATATCATTGGATCGGGCATCATCCCCGTCGCAATCGAATTCAT GGACAGGCCGGCGATCGAGATCTGCGAGGCCTTTGCCCAGGCCGGCTATCCGCTCGACGTCGAAGCATTGCTGATCGTCG AAGTGGAAGGCTCCGAGGCTGAGATGGATGCGACGCTCGCCGGCATCATCGAGATCGCCCGCCGCCACGGCGTGATGACG ATCAGGGAATCGCAATCGGCTCTGGAAGCGGCACTGATCTGGAAGGGGCGTAAGTCGGCCTTCGGCGCAACCGGCCGGAT TGCCGACTATATCTGCATGGACGGAACGGTGCCGCTGAGCCAGCTCTCCCATGTCTTGCGCCGGACCGGGGAGATCGTCG CCGGCTACGGCCTGCGGGTAGCGAATGTCTTCCATGCCGGCGATGGCAACATGCATCCGCTGATCCTCTACAACATCAAC GATCCGGAGGAAGCTGCCCGCGCGGAAGCTGCCGGCAACGACATACTGAAGCTTTGCGTCGAGGCGGGCGGCTGCCTGAC CGGGGAACACGGCGTCGGCATCGAGAAACGCGATCTGATGCTGCACCAGTACAGCAGGGCCGATCTCGGCCAGCAGATGG CGGCGCGCGCCGCCTTCGATCCGCAATGGCTTATGAACCCGTCGAAGGTTTTTCCGCTCGAAGGACGGCCCGCGGCATGA Protein sequence : MPETIGFLKPRQAVLDRRREIVADLADLLPEGGLISDERGLKPFETDAFIAYRRMPLAVVLPETTEHVAAVLKYCSRYGI PIVPRGAGTSLSGGAIPQEDAIVVGLSKMSRTLDIDLFNRTATVQAGVTNLNISDAVSADGFFYAPDPSSQLACTIGGNI GMNSGGAHCLKYGVTTNNLLGVKMVLFDGTVIELGGKALDAPGYDLLGLVCGSEGQLGIVTEATVRLIAKPEGARPVLFG FASSESAGSCVADIIGSGIIPVAIEFMDRPAIEICEAFAQAGYPLDVEALLIVEVEGSEAEMDATLAGIIEIARRHGVMT IRESQSALEAALIWKGRKSAFGATGRIADYICMDGTVPLSQLSHVLRRTGEIVAGYGLRVANVFHAGDGNMHPLILYNIN DPEEAARAEAAGNDILKLCVEAGGCLTGEHGVGIEKRDLMLHQYSRADLGQQMAARAAFDPQWLMNPSKVFPLEGRPAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 2e-100 | 48 |
