Gene Information

Name : lolD (SFxv_1274)
Accession : YP_005726810.1
Strain : Shigella flexneri 2002017
Genome accession: NC_017328
Putative virulence/resistance : Resistance
Product : Lipoprotein-releasing system ATP-binding protein lolD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1221712 - 1222413 bp
Length : 702 bp
Strand : +
Note : -

DNA sequence : 
ATGAATAAGATCCTGTTGCAATGCGACAACCTGTGCAAACGCTATCAGGAAGGCAGTGTGCAAACCGATGTGCTGCTCAA
TGTCAGTTTCAGCGTGGGCGAAGGTGAAATGATGGCAATTGTCGGTAGCTCTGGTTCCGGTAAAAGTACCTTGCTGCACC
TGTTAGGCGGGCTGGATACGCCAACCTCCGGCGATGTGATCTTTAACGGTCAGCCGATGAGCAAACTGTCTTCAGCGGCG
AAAGCAGAACTGCGCAACCAGAAGCTGGGCTTTATTTATCAGTTTCACCACCTGCTGCCGGATTTTACTGCCCTGGAAAA
CGTGGCTATGCCACTGCTGATTGGCAAGAAAAAGCCCGCTGAAATCAACAGCTGTGCACTGGAGATGTTAAAAGCGGTGG
GGCTGGAGCATCGTGCGAATCACCGCCCATCTGAACTTTCTGGCGGCGAACGCCAGCGTGTAGCGATTGCCCGTGCGCTG
GTCAATAATCCGCGTCTGGTACTGGCGGATGAACCTACCGGTAACCTCGATGCGCGTAACGCCGACAGCATCTTCCAGTT
GCTTGGGGAGTTGAATCGCTTGCAGGGCACCGCTTTCCTGGTGGTCACTCACGACCTGCAACTGGCGAAACGTATGAGCC
GCCAACTGGAAATGCGTGATGGACGTCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAA

Protein sequence : 
MNKILLQCDNLCKRYQEGSVQTDVLLNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAA
KAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSCALEMLKAVGLEHRANHRPSELSGGERQRVAIARAL
VNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELSLMGAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD YP_005726810.1 Lipoprotein-releasing system ATP-binding protein lolD NC_008702.1.4606598. Protein 4e-36 48
lolD YP_005726810.1 Lipoprotein-releasing system ATP-binding protein lolD NC_012469.1.7686878. Protein 1e-40 45