|
Name : SFxv_0279 (SFxv_0279) Accession : YP_005725904.1 Strain : Shigella flexneri 2002017 Genome accession: NC_017328 Putative virulence/resistance : Unknown Product : putative Rhs-family protein Function : - COG functional category : - COG ID : - EC number : - Position : 279282 - 281495 bp Length : 2214 bp Strand : + Note : - DNA sequence : ATGAGTTTTGTATCTACGGGTAATAAACCAGTTGGAAACGGTGGACCCGTCATCACCACACCACCAATAGCTGGCGAAAG TGGCGGTATGAGCACAGGTTCAGCTGTAACCGATGTATCTGGTGCCGCCGAGGAGATGGCAGAACAGGCTGCGGCGGACC TGTTTGGTGCGCTGCCGGAACCGTCAGGTCTGGTTAAAGCCGCAGTAGCTGCTGCGCAGGCTGCCGCTGCAGCAGCAGGG ATCTCGGATATGGCTGGTGCAGTTCAGGATGCAGCGGCGTCGCTTGCAGCCGGTGCTCCGGGGGCGCATAACGTCACAGT AAGTGGTAGTGCGGTGCCGCCGCAGATGCTTTTGTTTGCAGGCATGAATGGTTCGGAAGGGCTTGGGAATCTGTTTTCTT ACACAGTACAGCTTAAAACGCTGGACGCCCTGAACCTGGGGTACGTTTCCCCCGCTGCTAACCTGCCGCTTCAGCTCATG GTGGGCAAAGACCTGTGCGTCAGTATCGAACTGGACGGCGGCGGAAAACGGTATATCAGCGGGCTGGTGACGGCGGCGAG GGTGGTCGGCCATGAGAGCCGTTCGGTAACGTATGAATTACGCATTGAGCCATGGCTGAAGCTGCTGACCCATACCAGCG ACTACAAAGCGTTCCAGAACAAAACCGTGGTGGATATTCTCGATGAAGTACTGGATGAATATTCCTTTCCGGTGGAAAAG CGGCTGGTGGAAAATTATCCACCCCGCGCCTGGCAGGTGCAGTATGGTGAAACCGACTTCGATTTCATCCAGCGCCTGAT GCAGGAATGGGGGATTTACTGGTGGTTTGAGCACAGCGAGAACAGCCACACGCTGGTGCTGGTGGATGCCATCAATGGTC ATAAAGCGTGCCCTGACTCGCCGCTGGTGGAGTGGCACCAGGAAGGGCTGAAACTGGATAAGGAATTTATCCACACCATT ACGGCCAGTGAGAGGCTGCGTACTGGAAAGTGGGTGATGGACGATTTTGATTTTATGAAGCCTCGTTCGCTGCTTAAAAG TACCGTGGCCAGTCCGCGTGATACCGGTCATGCTGAATACGAGCATTACGAATGGCCTGGTGATTACTTCACTACGGGCG AAGGCGAGATGCTGACGCGCATTCGTATGGAAGCGCAGCGCAGCCCAGGCAGCCGGGCACATGGGGCCGGTCATATCCGT ACCCTCATGACCGGGTACACCTTTACGTTGATGAATCACCCGACGGCAGAAATTAATCAGGAATATCTGCTGGTACAGAC CACTCTGTTTTTACGGGATAATGCGCAGCACAGCGGTCAGGATCAGCATTTTACCTATGTCACCACGTTTGAACTGCACC CCACCAGCGAAGTTTACCGCCCACAACGAACCCTGAGCAAACCCCACACCAAAGGCCCGCAGAGCGCCATCGTCACCGGC CCGGCGGGGCAGGAAATCTGGACGGATAAATATGGCCGGGTGAAGGTGCAGTTTGGCTGGGACCGTTACGGAAAGAATGA CGAAAACAGTTCCTGCTGGATCCGCGTCAGCTATCCGTGGGCGGGTAAAGGATTCGGCATGATCCAGATCCCGCGTATTG GCCAGGAAGTACTGGTGGATTTCAAAAACGGCGATCCGGATTTGCCCATCATCGTGGGGCGCACCTATAACCAGGACACC ATGCCGCCGTGGGGGCTGCCGGGCATGGCGTCGCAGAGTGGGATATTCAGCCACTCATTGCAGGGAGGGCCGACTAACGG AAATATGCTGCGCTTCGATGATAAAACGGGTGCGGAAGAGGTGAAGTTCCATGCGGAAAAAGACCTCAATACCACGGTAA AAAACAATGAAACCCACACGGTCATGGTCGATCGCATAAAAACCATTGTCAAAAATGAAACCATCAGCGTGGGAGAAGAC CGTAATGCCACCATCACAAAAAATGATGGTCTTTCCGTCAAACTGGCTCAAACCATCAATGTCGGAACGACATATCGTCT GGATGTTGGCGATCAATTTACCCTTCGTTGCGGCAATGCAGCGCTTGTATTACACAAGGATGGCTCGATTGAGTTTTGCG GAAAACAACTGTTACTGCACACCAGCGATGTTATGCAACTCATTGGCAGTGGCATTGATATGAATCCGGATGGCGGCACA GCCATGACTGCGGATGATATTGCCCCGTTACCTACCCCCGACGTTTCTGAATAA Protein sequence : MSFVSTGNKPVGNGGPVITTPPIAGESGGMSTGSAVTDVSGAAEEMAEQAAADLFGALPEPSGLVKAAVAAAQAAAAAAG ISDMAGAVQDAAASLAAGAPGAHNVTVSGSAVPPQMLLFAGMNGSEGLGNLFSYTVQLKTLDALNLGYVSPAANLPLQLM VGKDLCVSIELDGGGKRYISGLVTAARVVGHESRSVTYELRIEPWLKLLTHTSDYKAFQNKTVVDILDEVLDEYSFPVEK RLVENYPPRAWQVQYGETDFDFIQRLMQEWGIYWWFEHSENSHTLVLVDAINGHKACPDSPLVEWHQEGLKLDKEFIHTI TASERLRTGKWVMDDFDFMKPRSLLKSTVASPRDTGHAEYEHYEWPGDYFTTGEGEMLTRIRMEAQRSPGSRAHGAGHIR TLMTGYTFTLMNHPTAEINQEYLLVQTTLFLRDNAQHSGQDQHFTYVTTFELHPTSEVYRPQRTLSKPHTKGPQSAIVTG PAGQEIWTDKYGRVKVQFGWDRYGKNDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGRTYNQDT MPPWGLPGMASQSGIFSHSLQGGPTNGNMLRFDDKTGAEEVKFHAEKDLNTTVKNNETHTVMVDRIKTIVKNETISVGED RNATITKNDGLSVKLAQTINVGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLLLHTSDVMQLIGSGIDMNPDGGT AMTADDIAPLPTPDVSE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0319 | NP_454896.1 | Rhs-family protein | Not tested | SPI-6 | Protein | 0.0 | 85 |
