Gene Information

Name : glcB (SFxv_3309)
Accession : YP_005728639.1
Strain : Shigella flexneri 2002017
Genome accession: NC_017328
Putative virulence/resistance : Unknown
Product : Malate synthase G
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3147238 - 3149409 bp
Length : 2172 bp
Strand : -
Note : -

DNA sequence :
ATGAGTCAAACCATAACCCAGGGCCGTTTACGCATTGACGCCAATTTTAAACGTTTTGTGGATGGAGAAGTTTTGCCGGG
CGTGGAACTGGACGCTGCTGCATTCTGGCACAATGTTGATGAGATCGTTCACGATCTGGCACCAGAAAATCGTCAGTTGC
TGGCAGAACGCGATCGCATTCAGGCGGCGCTTGATGAGTGGCATCGCAGCAATCCGGGGCCGGTAAAAGATAAAGCGGCC
TATAAATCTTTCCTTCGTGAACTGGGCTACCTGGTGCCGCAACCGGAGCGCGTGACGGTGGAAACCACGGGCATTGACAG
CGAAATCACCAGTCAGGCGGGGCCACAGCTGGTGGTTCCGGCAATGAACGCCCGCTACGCGCTGAACGCGGCGAACGCTC
GCTGGGGCTCACTGTACGATGCGTTATACGGCAGCGACATCATCCCGCAGGAAGGGGCGATGGTCAGTGGCTACGATCCG
CAGCGCGGTGAGCAGGTTATCGCCTGGGTTCGACGTTTCCTCGATGAATCACTACCGCTGGAAAACGGCAGCTATCAGGA
TGTGGTGGCGTTTAAGGTGGTCGATAAACAATTACGCATCCAGTTGAAAAATGGTAAAGAAACCACGTTACGTACTCCAG
CACAGTTTGTCGGTTACCGTGGCGATGCCGCTGCGCCGACCTGCATTTTGCTGAAAAATAACGGCCTGCATATTGAACTG
CAAATTGATGCCAACGGGCGGATTGGCAAAGACGATCCGGCGCACATCAACGATGTTATCGTCGAAGCTGCTATCAGTAC
CATTCTCGACTGCGAAGATTCGGTCGCGGCGGTTGATGCGGAAGATAAAATCCTGCTGTACCGCAATCTGCTGGGCCTGA
TGCAGGGGACTCTGCAAGAGAAAATGGAGAAAAACGGTCGGCAAATCGTACGTAAACTGAATGACGATCGTCAGTACACC
GCCGCCGATGGCTCTGAAATTTCTCTGCACGGACGCTCGTTGCTGTTTATCCGCAACGTGGGTCATTTGATGACCATTCC
TGTGATTTGGGACAGCGAAGGCAATGAAATCCCGGAAGGTATTCTTGATGGCGTCATGACTGGCGCGATTGCCCTCTATG
ATTTAAAAGTGCAGAAAAACTCGCGCACTGGCAGCGTCTATATTGTGAAACCGAAAATGCACGGTCCGCAGGAAGTGGCG
TTCGCCAACAAACTGTTTACCCGCATTGAGACAATGCTCGGTATGGCACCGAATACCCTGAAAATGGGCATTATGGATGA
AGAACGCCGGACCTCGCTGAACTTGCGTAGCTGTATCGCTCAGGCGCGCAACCGCGTGGCGTTCATCAATACCGGTTTCC
TCGACCGTACCGGCGATGAAATGCATTCGGTGATGGAAGCTGGCCCGATGCTGCGTAAAAACCAGATGAAATCGACGCCG
TGGATCAAAGCCTACGAACGTAATAACGTGCTTTCCGGTCTGTTCTGTGGGCTGCGCGGTAAAGCGCAAATCGGTAAAGG
CATGTGGGCAATGCCGGACCTGATGGCAGACATGTACAGCCAGAAGGGCGACCAACTGCGTGCCGGGGCAAACACAGCCT
GGGTTCCGTCACCAACCGCTGCTACGCTCCATGCGCTGCACTACCACCATACCAACGTACAGAGCGTGCAAGCCAACATT
GCCCAGACCGAGTTCAGTGCTGAATTTGAACCGCTGCTGGACGATCTGCTGACTATTCCGGTGGCTGAAAACGCTAACTG
GTCGGCGCAAGAGATCCAACAAGAGCTGGATAACAACGTGCAGGGGATTCTGGGGTACGTGGTGCGTTGGGTGGAGCAGG
GGATTGGTTGTTCAAAAGTGCCGGATATTCACAACGTGGCGCTGATGGAAGACCGCGCAACGCTGCGTATCTCCAGCCAG
CATATCGCCAACTGGTTACGTCACGGTATTCTGACCAAAGAACAGGTGCAGGCGTCGCTGGAGAATATGGCGAAAGTGGT
TGATCAGCAAAATGCTGGCGATCCGGCTTATCGTCCGATGGCGGGGAATTTCGCTAACTCGTGTGCTTTTAAAGCTGCCA
GCGATTTAATCTTCCTCGGCGTGAAACAGCCAAACGGTTATACCGAACCGTTATTACACGCCTGGCGTTTACGCGAAAAA
GAAAGTCATTAA

Protein sequence :
MSQTITQGRLRIDANFKRFVDGEVLPGVELDAAAFWHNVDEIVHDLAPENRQLLAERDRIQAALDEWHRSNPGPVKDKAA
YKSFLRELGYLVPQPERVTVETTGIDSEITSQAGPQLVVPAMNARYALNAANARWGSLYDALYGSDIIPQEGAMVSGYDP
QRGEQVIAWVRRFLDESLPLENGSYQDVVAFKVVDKQLRIQLKNGKETTLRTPAQFVGYRGDAAAPTCILLKNNGLHIEL
QIDANGRIGKDDPAHINDVIVEAAISTILDCEDSVAAVDAEDKILLYRNLLGLMQGTLQEKMEKNGRQIVRKLNDDRQYT
AADGSEISLHGRSLLFIRNVGHLMTIPVIWDSEGNEIPEGILDGVMTGAIALYDLKVQKNSRTGSVYIVKPKMHGPQEVA
FANKLFTRIETMLGMAPNTLKMGIMDEERRTSLNLRSCIAQARNRVAFINTGFLDRTGDEMHSVMEAGPMLRKNQMKSTP
WIKAYERNNVLSGLFCGLRGKAQIGKGMWAMPDLMADMYSQKGDQLRAGANTAWVPSPTAATLHALHYHHTNVQSVQANI
AQTEFSAEFEPLLDDLLTIPVAENANWSAQEIQQELDNNVQGILGYVVRWVEQGIGCSKVPDIHNVALMEDRATLRISSQ
HIANWLRHGILTKEQVQASLENMAKVVDQQNAGDPAYRPMAGNFANSCAFKAASDLIFLGVKQPNGYTEPLLHAWRLREK
ESH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcB CAE85241.1 GlcB protein, malate synthase G Not tested PAI V 536 Protein 0.0 99