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Name : HPKB_0223 (HPKB_0223) Accession : YP_005761754.1 Strain : Helicobacter pylori 52 Genome accession: NC_017354 Putative virulence/resistance : Unknown Product : sodium-dependent transporter Function : - COG functional category : - COG ID : - EC number : - Position : 227300 - 228958 bp Length : 1659 bp Strand : + Note : Consensus COG by CONSORF: COG0471 DNA sequence : ATGGAAAATCATTCGCATGCCAATACGCATACAGATACGCGCACCGATGATAAAAGCACTAAGATCGTGCGTTTGTTGGG GTTAATAGGGGGGGTGTTGATCGCGCTCATTATCTATTACGCTTTAAACGCTCAATTGTCTCATATTGCAGAAGAAATCC CCAAGCTTAGTTCTTTAAATTATAAAGCGATGCCTGTTGTGGCTGGGGTGGCTGTTTTAATGGGGATATGGTGGATGACT GAAGCCATTGACCTGCCCGCAACCGCGCTTTTACCTTTAGTGCTTTTTAGCGTCTTTAGCGTGGATCAATTCTCTAGCGT TAGCTCTTCTTACGCATCGCCGATTATCTTTCTTTTCATGGGAGGGTTTATTTTAGCTTTAAGCATGCAAAAATGGAACT TGCACACGCGCATCGCTTTAAGCATTATTTTATTAGTAGGCACAAGCCCTAGGAGGTTGATTCTAGGTTTCATGATAGCT ACAGGCTTTCTGTCTATGTGGGTGAGCAATACCGCAACGGCGGTGATGATGCTCCCTATTGGCATGAGCGTTTTGCAATT AGTCGCTAAACTTGTGGGCAAAGAAAACGCCTCTAATTCATGGCATCAAAAAGAAGAAATCACCAAAGCGCATGGGGGTA TTATGGGAAATATCGTGCATAAGGGCAAAGATATTACCCAAGTCGTTCAAGAAAAGACCATCATTTATCGCACGAATTTC AGTATTTGCTTGATGCTTGGCATCGCTTATGCGGCTTCTATTGGCTCTTTAGGCACTCTTATTGGCACGCCGCCTAACGC TTTATTAGCCGGCTATATGAAAACCGCTTTCAATATTGAAATTGATTTCGCCCGGTGGATGGTGTTTGGGACGCCGTTAG CCTTCATCATGCTCATTTTATCGTGGCTCTTGCTCACTTATGTGATTTTCCCTTTAAAGATTAAAGAAATCCCAGGTGGT AAGGAAGTCATTAGGGCAGAGTTAAAAAAATTAGGCCGTTTGAGTCGGGCGGAAATCTCTGTGGGCGTTATTTTTATTTT AGCGTCTTTAGGGTGGATTTTTTTAGATACGATTTTAAAATCTTGGGGCATTAAAATAGATAAAATTGATTCAGTGATCG CTATGGGGGTTTCTGCACTTTTATTCATTTTGCCCGCTAATAATCAGGGCGATAGGCTCATTGATTGGGGTGTTGCTAAA AAACTCCCTTGGGATGTGTTGCTTTTATTTGGCGGCGGGTTAGCCTTGAGCACGCAATTTTCTAAAACCGGGTTGAGTTT GTGGATCGGGCATTTAGTTTCTGGCTTTTCGCATTTACCGATTTTATTCATTATTTTCATGGTAACTTTAATGGTCATTT TCTTAACCGAAATCACTTCTAACACCGCCACCGCTGCGGCGTTTTTACCGGTGATTGGAGGGGTTGCGATGGGCATGGGT TATGAAAATCATCAGAGCTTGTTATTGACCATTCCTGTAGCCTTGAGTGCGACTTGCGCGTTCATGCTCCCTGTAGCCAC CCCACCCAATGCGATAGCTTATGGCTCTGGGTATGTTAAAATAACGGATATGATTAAAGCCGGTTTGTGGCTTAATCTGG TAGGCGTTGTTTTGATTAGCGCGTTTAGCTATTTTTTAGTTTCGCTAGTATTTAATTAA Protein sequence : MENHSHANTHTDTRTDDKSTKIVRLLGLIGGVLIALIIYYALNAQLSHIAEEIPKLSSLNYKAMPVVAGVAVLMGIWWMT EAIDLPATALLPLVLFSVFSVDQFSSVSSSYASPIIFLFMGGFILALSMQKWNLHTRIALSIILLVGTSPRRLILGFMIA TGFLSMWVSNTATAVMMLPIGMSVLQLVAKLVGKENASNSWHQKEEITKAHGGIMGNIVHKGKDITQVVQEKTIIYRTNF SICLMLGIAYAASIGSLGTLIGTPPNALLAGYMKTAFNIEIDFARWMVFGTPLAFIMLILSWLLLTYVIFPLKIKEIPGG KEVIRAELKKLGRLSRAEISVGVIFILASLGWIFLDTILKSWGIKIDKIDSVIAMGVSALLFILPANNQGDRLIDWGVAK KLPWDVLLLFGGGLALSTQFSKTGLSLWIGHLVSGFSHLPILFIIFMVTLMVIFLTEITSNTATAAAFLPVIGGVAMGMG YENHQSLLLTIPVALSATCAFMLPVATPPNAIAYGSGYVKITDMIKAGLWLNLVGVVLISAFSYFLVSLVFN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| DIP0179 | NP_938571.1 | hypothetical protein | Not tested | Not named | Protein | 5e-101 | 52 |
