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Name : nifS (HPV225_0237) Accession : YP_005763181.1 Strain : Helicobacter pylori v225d Genome accession: NC_017355 Putative virulence/resistance : Unknown Product : cysteine desulfurase, NifS family Function : - COG functional category : - COG ID : - EC number : 2.8.1.7 Position : 216338 - 217501 bp Length : 1164 bp Strand : + Note : - DNA sequence : TTGTTACAACGAATTTATTTAGACAATAACGCTACAACTAGGATTGACCCTAAAGTCAAAGAGATCATGGATCCTTTTTT AAGGGATCATTACGGGAACCCTAGCTCGTTGCACCAGTTTGGCACAGAAACCCACCCAGCCATTGCAGAAGCGCTAGACA AGATTTATAAGGGCATTAACGCTAGGGATATAGATGATGTGATCATCACTTCTTGCGCGACAGAAAGCAATAATTGGGTT TTAAAGGGCGTGTATTTTGATGAATGCTTGAAAAAAGGCAAAAACCATATTATAACCACGGTTGCAGAGCATCCGGCGGT GCGATCCACTTGCAATTTTTTAGAAAGCTTGGGGGTGGAGGTTACCTACTTGCCCATTAATGAGCATGGGAGTATCACCG CAGATCAAGTCAAAGAAGCGATCACAGAAAAAACCGCTTTAGTGAGCGTGATGTGGGCGAATAATGAAACCGGTCTCATT TTCCCTATTGAAGAAATTGGGGCTATTTGTAAAGAAAAGGGCGTGTTGTTCCATACCGATGCGGTGCAAGCGATTGGTAA AATCCCTGTAGATGTGTTAAAAGCGAATGCGGATTTCCTTTCTTTTAGCGCGCACAAGTTTCATGGGCCTAAAGGCATTG GGGGGTTGTATATTAGAAGTGGGGTGGGATTGACCCCTCTTTTTCATGGCGGGGAGCATATGAATGGCAGGCGTAGCGGG ACTTTGAATGTGCCTTATATCGTGGGCATGGGCGAAGCGATGAAATTAGCCGTAGAGCATTTAGACTATGAAAAAGAAGT GGTAGGGAAATTGCGCGACAAATTAGAAGAAGCGCTTTTGAAAATCCCTGATGTGATGGTGGTGGGGGATCGAATCCATC GTGTGCCTAACACGACTTTAATCAGCGTGAGAGGGATTGAAGGAGAGGCCATGCTGTGGGATTTGAATCGCTCTAATATC GCCGCTTCCACAGGGAGCGCGTGCGCGAGTGAGGATTTAGAGGCTAATCCTGTCATGGTGGCGATTGGAGCGAGTAAGGA ATTAGCTCATACCGCTATCAGGCTTTCATTGAGCCGTTTTAACACGGAAGCTGAAATTGATAAAACGATTGAAGTTTTCT CTCAAGCGGCTACAAGATTGAGAAACATTTCAAGCTCTTATTAA Protein sequence : MLQRIYLDNNATTRIDPKVKEIMDPFLRDHYGNPSSLHQFGTETHPAIAEALDKIYKGINARDIDDVIITSCATESNNWV LKGVYFDECLKKGKNHIITTVAEHPAVRSTCNFLESLGVEVTYLPINEHGSITADQVKEAITEKTALVSVMWANNETGLI FPIEEIGAICKEKGVLFHTDAVQAIGKIPVDVLKANADFLSFSAHKFHGPKGIGGLYIRSGVGLTPLFHGGEHMNGRRSG TLNVPYIVGMGEAMKLAVEHLDYEKEVVGKLRDKLEEALLKIPDVMVVGDRIHRVPNTTLISVRGIEGEAMLWDLNRSNI AASTGSACASEDLEANPVMVAIGASKELAHTAIRLSLSRFNTEAEIDKTIEVFSQAATRLRNISSSY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96060.1 | cysteine desulfurase | Not tested | T-PAI | Protein | 2e-49 | 41 |
