Gene Information

Name : rnhA (HPCU_03585)
Accession : YP_005766787.1
Strain : Helicobacter pylori Cuz20
Genome accession: NC_017358
Putative virulence/resistance : Unknown
Product : ribonuclease H
Function : -
COG functional category : -
COG ID : -
EC number : 3.1.26.4
Position : 723386 - 723850 bp
Length : 465 bp
Strand : +
Note : COG0328 Ribonuclease HI

DNA sequence :
ATGCAAGAGATTGAAATTTTTTGCGATGGTTCTTCTTTAGGCAATCCTGGGCCAGGCGGTTATGCGGCGATTTTACGCTA
TAAAGATAAAGAAAAAATTATCAGTGGAGGCGAATCATTCACCACGAATAACCGCATGGAATTAAGAGCGCTCAATGAAG
CGTTAAAAATTTTGAAACGCCCATGCCATATCAAGCTTTATAGCGATTCGCAATATGTGTGCCAAGCGATCAATGTGTGG
CTAACTAACTGGCAAAAAAAGAATTTTTCTAAAGTCAAAAATGTGGATTTGTGGAAAGAATTTTTAGAAGTCTCTAAAGG
GCATTTGATCATGGCTGTTTGGATCAAGGGGCATAATGGGCATGCCGAGAATGAACGATGCGATAGCCTCGCTAAATTAG
AGGCGCAAAAACGGGTAAAAACGACCAAAGGGAAAAACGATGAAAAACAAACGCTCTCAAAATAG

Protein sequence :
MQEIEIFCDGSSLGNPGPGGYAAILRYKDKEKIISGGESFTTNNRMELRALNEALKILKRPCHIKLYSDSQYVCQAINVW
LTNWQKKNFSKVKNVDLWKEFLEVSKGHLIMAVWIKGHNGHAENERCDSLAKLEAQKRVKTTKGKNDEKQTLSK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 5e-28 51