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Name : iscS (HMPREF4655_20462) Accession : YP_005769589.1 Strain : Helicobacter pylori 35A Genome accession: NC_017360 Putative virulence/resistance : Unknown Product : cysteine desulfurase Function : - COG functional category : - COG ID : - EC number : 2.8.1.7 Position : 449332 - 450495 bp Length : 1164 bp Strand : + Note : COG: COG1104; Pfam: PF00266; InterPro: IPR000192 DNA sequence : TTGTTACAACGAATTTATTTAGACAATAACGCTACAACTAGGATTGACCCTAAAGTCAAAGAGATCATGGATCCTTTTTT AAGGGATCATTACGGGAATCCTAGCTCGTTGCACCAGTTTGGCACAGAAACCCACCCAGCCATTGCAGAAGCGCTAGACA AGCTTTATAAGGGCATTAACGCTAGGGATATAGATGATGTGATCATCACTTCTTGCGCGACAGAAAGCAATAATTGGGTT TTAAAGGGCGTGTATTTTGATGAATGTTTGAAAAAAGGCAAAAACCATATCATAACCACGGTTGCAGAGCATCCGGCAGT GCGATCCACTTGCAATTTTTTAGAAAGCTTAGGGGTGGAGATTACTTACTTGCCCATTAATGAGCATGGGAGTATCACCG CAGAGCAAGTCAAAGAAGCGATCACAGAAAAAACCGCTTTAGTGAGCGTGATGTGGGCGAATAATGAAACCGGTCTTATT TTCCCTGTTGAAGAAATTGGGGCTATTTGTAAAGAAAAGGGCGTGTTGTTCCATACCGATGCGGTGCAAGCGATTGGTAA AATCCCTGTAGATGTGTTAAAAGCGAATGTGGATTTCCTTTCTTTTAGTGCACACAAGTTTCATGGGCCTAAAGGCATTG GGGGGTTGTATATTAGAAGTGGGGTGGAATTAACCCCTCTTTTTCATGGCGGGGAGCATATGAATGGCAGGCGCAGCGGG ACTTTGAATGTGCCTTATATCGTGGGCATGGGCGAAGCGATGAGATTAGCCGTAGAGCATTTAGACTATGAAAAAGAAGT GGTAGGGAAATTGCGCGACAAATTAGAAGAAGCGCTTTTGAAAATCCCTGATGTGATGGTGGTGGGGGATCGAGTCCATC GTGTGCCTAATACGACTTTAATCAGCGTGAGAGGGATTGAAGGAGAGGCCATGCTGTGGGATTTGAATCGCTCTAATATC GCTGCTTCCACAGGGAGCGCGTGCGCGAGTGAGGATTTAGAGGCTAATCCTGTCATGGTGGCGATTGGAGCGAGTAAGGA ATTAGCTCATACCGCTATCAGGCTTTCATTGAGCCGTTTTAACACGGAAGCTGAAATTGATAAAACGATTGAAGTTTTCT CTCAAGCGGCTATAAGATTGAGAAACATTTCAAGCTCTTATTAA Protein sequence : MLQRIYLDNNATTRIDPKVKEIMDPFLRDHYGNPSSLHQFGTETHPAIAEALDKLYKGINARDIDDVIITSCATESNNWV LKGVYFDECLKKGKNHIITTVAEHPAVRSTCNFLESLGVEITYLPINEHGSITAEQVKEAITEKTALVSVMWANNETGLI FPVEEIGAICKEKGVLFHTDAVQAIGKIPVDVLKANVDFLSFSAHKFHGPKGIGGLYIRSGVELTPLFHGGEHMNGRRSG TLNVPYIVGMGEAMRLAVEHLDYEKEVVGKLRDKLEEALLKIPDVMVVGDRVHRVPNTTLISVRGIEGEAMLWDLNRSNI AASTGSACASEDLEANPVMVAIGASKELAHTAIRLSLSRFNTEAEIDKTIEVFSQAAIRLRNISSSY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96060.1 | cysteine desulfurase | Not tested | T-PAI | Protein | 1e-49 | 41 |
