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Name : HPSA_01115 (HPSA_01115) Accession : YP_005770854.1 Strain : Helicobacter pylori SouthAfrica7 Genome accession: NC_017361 Putative virulence/resistance : Unknown Product : cysteine desulfurase Function : - COG functional category : - COG ID : - EC number : - Position : 222681 - 223844 bp Length : 1164 bp Strand : + Note : COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes DNA sequence : TTGTTACAACGAATTTATTTAGACAATAACGCTACAACCAAGATTGACCCTAAAGTCAAAGAAATCATGGATCCCTTTTT AAGGGATCATTACGGGAATCCTAGCTCTTTGCACCAGTTTGGCACCGAAACCCATCCGGCCATTGCAGAAGCGCTAGACA AGCTTTATAAGGGCATTAACGCCAGGGATATAGACGATGTGATCATCACTTCTTGCGCGACAGAAAGCAATAATTGGGTT TTAAAGGGCGTGTATTTTGATGAATGCTTGAAAAAAGGCAAAAACCATATTATCACCACGGTTGCAGAGCATCCGGCGGT GCGATCCACTTGCAATTTTTTAGAAAGCTTGGGGGTAGAGGTTACTTACTTGCCTATTAATGAGCATGGGAGCATCACTG CAGAGCAAGTCAAAGAAGCGATCACAGATAAAACCGCTTTAGTGAGCGTGATGTGGGCGAATAATGAAACCGGTCTCATT TTCCCTATTGAAGAAATCGGGGCTATCTGTAAAGAAAAGGGCGTGTTGTTCCATACCGATGCGGTGCAAGCGATTGGTAA AATCCCTGTAGATGTGTTAAAGGCGAACGTGGATTTCCTTTCTTTTAGCGCGCACAAATTCCATGGACCTAAAGGCATTG GGGGGTTGTATATTAGAAGTGGGGTGGGATTGACCCCTCTTTTTCATGGAGGCGAGCACATGAATGGCAGGCGCAGCGGG ACTTTGAACGTGCCTTATATTGTGGGCATGGGCGAAGCGATGAGATTAGCCGTAGAGCATTTAGACTATGAAAAAGAAGT GGTAGGGAAATTGCGCGACAAATTAGAAGAAGCGCTTTTGAAAATCCCTGATGTGATGGTGGTGGGCGATAGAATCCATC GTGTGCCTAACACGACTTTAATCAGCGTGAGAGGGATTGAAGGAGAGGCCATGCTGTGGGATTTGAATCGCTCTAATATC GCCGCTTCCACAGGAAGCGCGTGTGCGAGTGAGGATTTAGAGGCTAACCCTGTGATGGTAGCGATTGGAGCGAGCAAGGA ATTGGCTCATACCGCTATCAGGCTTTCATTGAGCCGTTTTAACACGGAAGCTGAAATTGACAAAACGATTGAAGTTTTCT CTCAAGCGGCTACAAGATTGAGAAATATTTCAAGCTCTTATTAA Protein sequence : MLQRIYLDNNATTKIDPKVKEIMDPFLRDHYGNPSSLHQFGTETHPAIAEALDKLYKGINARDIDDVIITSCATESNNWV LKGVYFDECLKKGKNHIITTVAEHPAVRSTCNFLESLGVEVTYLPINEHGSITAEQVKEAITDKTALVSVMWANNETGLI FPIEEIGAICKEKGVLFHTDAVQAIGKIPVDVLKANVDFLSFSAHKFHGPKGIGGLYIRSGVGLTPLFHGGEHMNGRRSG TLNVPYIVGMGEAMRLAVEHLDYEKEVVGKLRDKLEEALLKIPDVMVVGDRIHRVPNTTLISVRGIEGEAMLWDLNRSNI AASTGSACASEDLEANPVMVAIGASKELAHTAIRLSLSRFNTEAEIDKTIEVFSQAATRLRNISSSY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96060.1 | cysteine desulfurase | Not tested | T-PAI | Protein | 5e-50 | 42 |
