|
Name : tgt (HPSA_01425) Accession : YP_005770916.1 Strain : Helicobacter pylori SouthAfrica7 Genome accession: NC_017361 Putative virulence/resistance : Unknown Product : queuine tRNA-ribosyltransferase Function : - COG functional category : - COG ID : - EC number : 2.4.2.29 Position : 284388 - 285503 bp Length : 1116 bp Strand : - Note : COG0343 Queuine/archaeosine tRNA-ribosyltransferase DNA sequence : ATGGATTTTCAACTCCAAGCTACTGACAAACACGCGCGAGCTGGTCTTTTAAACTTAGCCCATTCTCAAGTAGAGACGCC TGTTTTTATGCCCGTAGGCACGCAAGGTTGCATCAAATCTTTAGACGCTATTGATGTGCAAGAAATTTTAGGCACTAAAC TCATTTTAGCCAACACTTACCACATGTATTTAAGGCCGGGCGAGAAAGTCGTTGAACAATTAGGCGGCTTGCATCGTTTC GCTCAATTTCATGGGAGTTTTTTAACGGATAGTGGGGGGTTTCAAGCCTTTAGTTTGAGCGATAATGTCAAATTGCAAGA AGACGGGATTGTTTTTAAATCCCATATTGATGGGAGCAAGCATCTCTTCACGCCCGCTAAAGTTTTAGATATTCAATATT CTTTAAACAGCGATATTATGATGGTTTTAGACGATTTGGTGGGCTTACCCGCTCCATTAAAGCGCCTTGAAGAATCCATC AAACGAAGCGCTAAATGGGCGAATCTCAGCCTAGAATACCACAAACAAAACAACCGCCCCAACAACAACCTTTTTGCCAT TATCCAAGGCGGCACTCATTTGAAAATGCGCAGTCTTAGCGTGGGATTAACGCATAGCAATTTTGATGGTTATGCGATAG GCGGTTTAGCGGTGGGCGAAAGCACAGATGAAATGCTAGAAACCATCGCTCACACCGCCCCCTTACTCCCTAAAGACAAA CCTCGCTACTTAATGGGCGTAGGCACGCCTGAAAACATTTTAGACGCTATCGGTTTAGGGGTGGATATGTTTGATTGCGT GATGCCCACCAGAAACGCCAGAAACGCCACCCTTTTCACGCATTCTGGCAAAATCTCTATCAAAAATGCGCCCTATAAAT TAGATGATACGCCTATTGAAGAAGATTGCGCTTGTTACACTTGCAAACGCTATTCTAAAGCCTATTTGCACCATCTCTTT AGGGCTAAAGAACTCACTTACGCTCGTTTAGCGAGCTTGCACAATTTGCATTTTTATTTGGAATTAGTTAAAAACGCCAG AAAAGCCATTTTAGAAAAGCGGTTTTTGAGTTTTAAAAAAGAGTTTTTAGAAAAATATAACTCTTGTTCTCATTGA Protein sequence : MDFQLQATDKHARAGLLNLAHSQVETPVFMPVGTQGCIKSLDAIDVQEILGTKLILANTYHMYLRPGEKVVEQLGGLHRF AQFHGSFLTDSGGFQAFSLSDNVKLQEDGIVFKSHIDGSKHLFTPAKVLDIQYSLNSDIMMVLDDLVGLPAPLKRLEESI KRSAKWANLSLEYHKQNNRPNNNLFAIIQGGTHLKMRSLSVGLTHSNFDGYAIGGLAVGESTDEMLETIAHTAPLLPKDK PRYLMGVGTPENILDAIGLGVDMFDCVMPTRNARNATLFTHSGKISIKNAPYKLDDTPIEEDCACYTCKRYSKAYLHHLF RAKELTYARLASLHNLHFYLELVKNARKAILEKRFLSFKKEFLEKYNSCSH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tgt | AAT96069.1 | Tgt | Not tested | T-PAI | Protein | 9e-75 | 46 |
| tgt | AAT96181.1 | Tgt | Not tested | T-PAI | Protein | 9e-75 | 46 |
| tgt | AAT96121.1 | Tgt | Not tested | T-PAI | Protein | 8e-75 | 45 |
| tgt | AAT96041.1 | Tgt | Not tested | T-PAI | Protein | 8e-75 | 45 |
| tgt | AAT96105.1 | Tgt | Not tested | T-PAI | Protein | 8e-75 | 45 |
