Gene Information

Name : rnhA (HPLT_03305)
Accession : YP_005772802.1
Strain : Helicobacter pylori Lithuania75
Genome accession: NC_017362
Putative virulence/resistance : Unknown
Product : ribonuclease H
Function : -
COG functional category : -
COG ID : -
EC number : 3.1.26.4
Position : 663775 - 664206 bp
Length : 432 bp
Strand : +
Note : COG0328 Ribonuclease HI

DNA sequence :
ATGCAAGAAATTGAAATTTTTTGCGATGGTTCTTCTTTAGGCAATCCCGGGCCAGGCGGTTATGCGGCGATTTTACGCTA
TAAGGATAAAGAAAAAATTATCAGTGGGGGCGAAAATTTCACCACGAATAACCGCATGGAATTAAGAGCGCTCAATGAAG
CGTTAAAAATTTTGAAACGCCCATGCCATATCACGCTTTATAGCGATTCGCAATATGTGTGCCAAGCGATCAATGTGTGG
CTAGCTAACTGGCAAAAAAAGAATTTTTCTAAAGTTAAAAATGTGGATTTATGGAAAGAATTTTTAAAAGTCTCTAAAGG
GCATTTGATTATGGCGGTGTGGATTAAGGGGCATAATGGGCATGCTGAGAATGAACGATGCGATAGTCTCGCTAAATTAG
AGGCGCAAAAACGGGTCAAAACGACCACTTAA

Protein sequence :
MQEIEIFCDGSSLGNPGPGGYAAILRYKDKEKIISGGENFTTNNRMELRALNEALKILKRPCHITLYSDSQYVCQAINVW
LANWQKKNFSKVKNVDLWKEFLKVSKGHLIMAVWIKGHNGHAENERCDSLAKLEAQKRVKTTT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 7e-28 51