|
Name : nifS (HPF16_0229) Accession : YP_005778464.1 Strain : Helicobacter pylori F16 Genome accession: NC_017368 Putative virulence/resistance : Unknown Product : cysteine desulfurase Function : - COG functional category : - COG ID : - EC number : - Position : 233946 - 235109 bp Length : 1164 bp Strand : + Note : - DNA sequence : TTGTTACAACGAATTTATTTAGACAATAACGCTACAACTAGGATTGACCCTAAAGTCAAAGAAATCATGGATCCGTTTTT AAGGGATCATTACGGGAATCCTAGCTCATTGCACCAGTTTGGCACAGAAACCCACCCAGCCATTGCAGAAGCGCTAGACA AGCTTTATAAGGGCATTAACGCTAGGGATATAGATGATGTGATCATCACTTCTTGCGCTACAGAAAGCAATAATTGGGTT TTAAAGGGCGTGTATTTTGATGAATGCTTGAAAAAAGGCAAAAACCATATTATAACCACGGTTGCAGAGCATCCGGCGGT GCGATCCACTTGCAATTTTTTAGAAAGCTTGGGGGTGGAGGTTACTTACTTGCCCATTAATGAGCATGGGAGTATCACCG CAGATCAAGTTAAAGAAGCGATCACAGAAAAAACCGCTTTAGTGAGCGTGATGTGGGCGAATAATGAAACCGGTCTCATT TTCCCTGTTGAAGAAATTGGGGCTATTTGTAAAGAAAAGGGCGTGTTGTTCCATACCGATGCGGTGCAAGCGATTGGTAA AATCCCTGTAGATGTGTTAAAAGCGAATGTAGATTTCCTTTCTTTTAGTGCACACAAGTTTCATGGGCCTAAAGGTATTG GGGGGTTGTATATTAGAAGTGGGGTGGAATTAACCCCTCTTTTTCATGGCGGGGAGCACATGAATGGCAGGCGCAGCGGG ACTTTGAATGTGCCTTATATCGTGGGCATGGGCGAAGCGATGAGATTAGCCGTAGAGCATTTAGACTATGAAAAAGAAGT GGTAGGGAAATTGCGCGACAAATTAGAAGAAGCGCTTTTGAAAATCCCTGATGTGATGGTGGTGGGGGATCGAATCCACC GTGTGCCTAACACGACTTTAATCAGCGTGAGAGGGATTGAAGGAGAGGCTATGCTGTGGGATTTGAATCGCTCTAATATC GCCGCTTCCACAGGGAGCGCATGCGCGAGTGAGGATTTAGAGGCTAATCCTGTCATGGTGGCGATTGGAGCGAGTAAGGA ATTAGCTCATACCGCTATCAGGCTTTCATTAAGCCGTTTTAACACGGAAGCTGAAATTGATAAAACGATTGAAGTTTTCT CTCAAGCGGCTACAAGATTGAGAAACATTTCAAGCTCTTATTAA Protein sequence : MLQRIYLDNNATTRIDPKVKEIMDPFLRDHYGNPSSLHQFGTETHPAIAEALDKLYKGINARDIDDVIITSCATESNNWV LKGVYFDECLKKGKNHIITTVAEHPAVRSTCNFLESLGVEVTYLPINEHGSITADQVKEAITEKTALVSVMWANNETGLI FPVEEIGAICKEKGVLFHTDAVQAIGKIPVDVLKANVDFLSFSAHKFHGPKGIGGLYIRSGVELTPLFHGGEHMNGRRSG TLNVPYIVGMGEAMRLAVEHLDYEKEVVGKLRDKLEEALLKIPDVMVVGDRIHRVPNTTLISVRGIEGEAMLWDLNRSNI AASTGSACASEDLEANPVMVAIGASKELAHTAIRLSLSRFNTEAEIDKTIEVFSQAATRLRNISSSY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96060.1 | cysteine desulfurase | Not tested | T-PAI | Protein | 4e-50 | 42 |
