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Name : HPGAM_01220 (HPGAM_01220) Accession : YP_005779975.1 Strain : Helicobacter pylori Gambia94/24 Genome accession: NC_017371 Putative virulence/resistance : Unknown Product : sodium-dependent transporter Function : - COG functional category : - COG ID : - EC number : - Position : 237645 - 239291 bp Length : 1647 bp Strand : + Note : COG0471 Di- and tricarboxylate transporters DNA sequence : ATGGAAAATCATTTGCATGTCGATACGAACGCTGATGACAAAAGCACCAAGATCGTTCGTTTGTTGGGTCTCATAGGGGG GGCGTTAATCGCACTTATTATCTATTACGCTTTAGACGCTCAAATGCCTCATATTGTAGAAGAAATCCCCAAGCTCAGTT CTTTGAATTATAAGGCGATGCCCGTTGTGGCTGGGGTGGCTGTTTTAATGGGGATATGGTGGATGACTGAAGCCATTGAC TTGCCTGCAACCGCGCTTTTACCTTTGGTGCTTTTTAGCGTCTTTAGCGTGGATCAATTCTCTAGCGTTAGCGCTTCTTA CGCATCGCCGATTATCTTTCTTTTTATGGGAGGGTTTATTTTAGCTTTAAGCATGCAAAAATGGAACTTGCACACGCGCA TCGCTTTAAGCATTATTTTATTGGTAGGCACAAGCCCTAGGAGGTTGATTTTAGGTTTCATGATTGCTACAGGCTTTTTG TCTATGTGGGTGAGCAATACTGCAACGGCGGTGATGATGTTTCCTGTTGGCATGAGCGTGTTGCAATTAGTCGCTAAACT TGTGGGTAAAGAAAACGCCTCTCATTCATGGTATCAAAAAGAAGAAATCACCAAAGCGCATGGGGGTATTATGGGCAATA TCGTGCATAAGGGTAAGGACATCGCTCAAGTGATTCAAGAAAAGACCACCATTTATCGCACGAATTTTAGCATTTGCTTG ATGCTTGGCATCGCTTATTCGGCTTCTATTGGCTCTTTAGGCACTCTGATTGGCACGCCCCCTAACGCTTTATTAGCCGG CTATATGAAAACCGCTTTCAATATTGAAATTGATTTCGCTCAGTGGATGGTGTTTGGGACGCCGTTAGCCTTTATCATGC TCATTTTATCGTGGCTCTTGCTCACTTATGTGATTTTCCCTTTAAAGATTAAAGAAATCCCAGGGGGTAAGGAAGTCGTT AGATTAGAGTTAAACAAATTAGGCCGTTTGAGTCAGGCGGAAATCTCGGTGGGGATTATTTTTATCCTAGCGTCTTTAGG GTGGATTTTTTTAGATACGATTTTAAAATCTTGGGGCATTAAGATAGATAAAATTGATTCCGTGATCGCTATGGGGGTTT CTGCGCTTTTATTTATTTTGCCCGCTAACAATCAGGGCGATAGGCTCATTGATTGGGATATTGCTAAAAAACTCCCTTGG GATGTGCTGCTTTTATTTGGCGGCGGGTTAGCTTTGAGCGCGCAATTTTCTAAAACCGGGTTGAGTTTGTGGATCGGGCA TTTGGTTTCTGGCTTTTCGCATTTACCGATTTTATTCATCATTGTCATGGTTACTTTAATGGTCATCTTCTTAACCGAAA TCACTTCTAACACCGCCACCGCTGCGGCGTTTTTGCCGGTGATTGGAGGGGTTGCGATGGGCATGGGTTATGAAAACCAC CAAAGTTTGTTATTGACCATTCCTGTAGCCTTGAGCGCGACTTGCGCGTTCATGCTTCCTGTGGCCACCCCACCGAATGC GATAGCTTATGGCTCTGGGTATGTTAAAATAACGGATATGATTAAAGCCGGTTTGTGGCTTAATTTAGTGGGCGTTGTTT TGATTAGCGCGTTTAGCTATTTTTTGGTTTCGCTGATATTTAATTGA Protein sequence : MENHLHVDTNADDKSTKIVRLLGLIGGALIALIIYYALDAQMPHIVEEIPKLSSLNYKAMPVVAGVAVLMGIWWMTEAID LPATALLPLVLFSVFSVDQFSSVSASYASPIIFLFMGGFILALSMQKWNLHTRIALSIILLVGTSPRRLILGFMIATGFL SMWVSNTATAVMMFPVGMSVLQLVAKLVGKENASHSWYQKEEITKAHGGIMGNIVHKGKDIAQVIQEKTTIYRTNFSICL MLGIAYSASIGSLGTLIGTPPNALLAGYMKTAFNIEIDFAQWMVFGTPLAFIMLILSWLLLTYVIFPLKIKEIPGGKEVV RLELNKLGRLSQAEISVGIIFILASLGWIFLDTILKSWGIKIDKIDSVIAMGVSALLFILPANNQGDRLIDWDIAKKLPW DVLLLFGGGLALSAQFSKTGLSLWIGHLVSGFSHLPILFIIVMVTLMVIFLTEITSNTATAAAFLPVIGGVAMGMGYENH QSLLLTIPVALSATCAFMLPVATPPNAIAYGSGYVKITDMIKAGLWLNLVGVVLISAFSYFLVSLIFN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| DIP0179 | NP_938571.1 | hypothetical protein | Not tested | Not named | Protein | 9e-101 | 52 |
