|
Name : HPGAM_01255 (HPGAM_01255) Accession : YP_005779980.1 Strain : Helicobacter pylori Gambia94/24 Genome accession: NC_017371 Putative virulence/resistance : Unknown Product : cysteine desulfurase Function : - COG functional category : - COG ID : - EC number : - Position : 243804 - 244967 bp Length : 1164 bp Strand : + Note : COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes DNA sequence : TTGTTACAACGAATTTATTTAGACAATAACGCTACAACTAGGATTGACCCTAAAGTCAAAGAGATCATGGATCCTTTTTT CAGGGATCATTATGGGAACCCTAGCTCGTTGCACCAGTTTGGCACAGAAACCCACCCAGCCATTGCAGAAGCGCTAGATA AGCTTTATAAAGGCATTAACGCTAGGGATATAGATGATGTGATCATCACTTCTTGTGCAACAGAAAGCAATAACTGGGTG TTAAAGGGCGTGTATTTTGATGAATGCTTGAAAAAAGGCAAAAACCATATTATCACCACGGTTGCAGAGCATCCGGCGGT GCGATCCACTTGTAATTTTTTAGAAAGCCTGGGGGTGGAGGTTACTTACTTGCCTATTAATGAGCATGGGAGCATCACCG CCGAGCAAGTCAAAGAAGCGATCACAGAAAAAACCGCTTTAGTGAGCGTGATGTGGGCGAATAATGAAACCGGTCTCATT TTCCCTATTGAAGAAATTGGGGCTATCTGTAAAGAAAAGGGCGTGTTGTTCCATACCGATGCGGTGCAAGCGATTGGTAA AATCCCTGTAGATGTGTTGAAGGCGAACGTGGATTTCCTTTCTTTTAGCGCGCACAAATTCCATGGGCCTAAAGGCATTG GGGGGTTGTATATTAGAAGTGGGGTGGGATTGACCCCTCTTTTTCATGGCGGGGAGCATATGAATGGTAGGCGCAGCGGG ACTTTGAATGTGCCTTATATCGTTGGCATGGGCGAAGCGATGAAATTAGCCGTAGAGCATTTAGACTATGAAAAAGAAGT GGTAGGGAAATTGCGCGACAAATTAGAAGAAGCGCTTTTGAAAATCCCTGATGTGATGGTGGTAGGGGATAGAATCCATC GTGTGCCTAACACGACTTTAATCAGCGTGAGAGGGATTGAAGGAGAGGCCATGCTGTGGGATTTGAATCGCTCTAATATC GCCGCTTCCACAGGGAGTGCGTGCGCGAGTGAGGATTTAGAGGCTAATCCTGTCATGGTGGCGATTGGAGCGAGTAAGGA ATTGGCTCATACCGCTATCAGGCTTTCATTGAGCCGTTTTAACACGGAAGCTGAGATTGACAAAACGATTGAAGTTTTCT CTCAAGCGGCTGTAAGATTGAGAAACATTTCAAGCTCTTATTAA Protein sequence : MLQRIYLDNNATTRIDPKVKEIMDPFFRDHYGNPSSLHQFGTETHPAIAEALDKLYKGINARDIDDVIITSCATESNNWV LKGVYFDECLKKGKNHIITTVAEHPAVRSTCNFLESLGVEVTYLPINEHGSITAEQVKEAITEKTALVSVMWANNETGLI FPIEEIGAICKEKGVLFHTDAVQAIGKIPVDVLKANVDFLSFSAHKFHGPKGIGGLYIRSGVGLTPLFHGGEHMNGRRSG TLNVPYIVGMGEAMKLAVEHLDYEKEVVGKLRDKLEEALLKIPDVMVVGDRIHRVPNTTLISVRGIEGEAMLWDLNRSNI AASTGSACASEDLEANPVMVAIGASKELAHTAIRLSLSRFNTEAEIDKTIEVFSQAAVRLRNISSSY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96060.1 | cysteine desulfurase | Not tested | T-PAI | Protein | 6e-49 | 41 |
