Gene Information

Name : HPGAM_03870 (HPGAM_03870)
Accession : YP_005780476.1
Strain : Helicobacter pylori Gambia94/24
Genome accession: NC_017371
Putative virulence/resistance : Unknown
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 787911 - 788582 bp
Length : 672 bp
Strand : +
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence :
ATGAGCGTGATCATCGCAGCGAATAATTTATGCTTACAATACCAGCAAAACGAGCCGGTCATTAAACATGCTAATTTACG
CATCAAACGAAAAGACTTCGTGTTCATTTCAGGGCCTAGCGGGAGCGGTAAAAGCACGCTTTTGCGCTCGTTTTATGGGG
ATTTGAAGGTTTTTAGCGGTAAATTAGAAGTTTGCAATATCAACATGAACAACGCTTCAAAATCAACGATTTTAGATTTG
CGTAAAAATATTGGCGTGGTTTTCCAAGATTATAAATTGATCCAAGATTACACGATTGAGCAAAACATCAAACTGCCGAT
GATTATTTGTGGCGTTAAAAAAGAAGAATGCCACTTGCAACTAGAAAAACTTTTAGGGCATATTGATTTACGCCATAAGG
CTAACCGCTACCCTAAAGAACTCAGTGGGGGCGAACAACAGCGAGTGGCTATGGCTAGGGCTATGGCGAACTGCCCTGAA
CTCATTTTAGCCGATGAACCTACCGGGAATTTAGACGATTATTCTAGCGATAAGATCTGGAGCCTGTTAAGGGGCATGAA
CACGCAATTAAACGCTACGATCGTGGTGGTTACGCACAAATTCCCTAAAAATTTTAGCGCTTATCACCGGAAATTTTACA
TAGAAGAGGGGGAAGTTTATGAATACTCTTAA

Protein sequence :
MSVIIAANNLCLQYQQNEPVIKHANLRIKRKDFVFISGPSGSGKSTLLRSFYGDLKVFSGKLEVCNINMNNASKSTILDL
RKNIGVVFQDYKLIQDYTIEQNIKLPMIICGVKKEECHLQLEKLLGHIDLRHKANRYPKELSGGEQQRVAMARAMANCPE
LILADEPTGNLDDYSSDKIWSLLRGMNTQLNATIVVVTHKFPKNFSAYHRKFYIEEGEVYEYS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-25 41