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Name : lolD (HMPREF0462_0661) Accession : YP_005785228.1 Strain : Helicobacter pylori 83 Genome accession: NC_017375 Putative virulence/resistance : Resistance Product : lipoprotein ABC superfamily ATP binding cassette transporter, ABC protein Function : - COG functional category : - COG ID : - EC number : 3.6.3.21 Position : 638134 - 638805 bp Length : 672 bp Strand : - Note : COG: COG1136; Pfam: PF00005; InterPro: IPR003593 DNA sequence : ATGAGTGTGATCATCTTAGCGAACAATCTGTGCTTACAATACCAGCAAAACGAACCGGTCATTAAGCATGCGAATTTGCG CATCAAACGCAAGGATTTTGTGTTCATTTCAGGGCCTAGCGGGAGCGGTAAAAGCACGCTTTTGCGATCGTTTTATGGGG ATTTAAAACTTTTTAGCGGTAAATTAGAAGTTTGCAATATCAACATGAACAACGCTTCAAAAGCGACGATTTTAGATTTG CGTAAAAATATTGGCGTGGTTTTCCAAGATTATAAATTGATCCAAGATTACACGATTGAGCAAAACATCAAACTGCCCAT GGTGATTTGTGGCGTTAAAAAAGAAGAATGCCATTTGCAGCTAGAAAAACTTTTAGGGCATATTGATTTACGCCATAAGG CTAACCGCTACCCCAAAGAGCTCAGCGGAGGCGAACAACAGCGAGTGGCTATGGCTAGGGCTATGGCGAACTGCCCTGAA CTCATTTTAGCCGATGAGCCTACCGGGAATTTAGACGATTATTCTAGCGATAAAATCTGGAGCTTGTTAAGGGGCATGAA CACGCAATTAAACGCTACGATCGTGGTGGTTACGCACAAATTCCCTAAAAATTTTAGCGCTTATCACCGAAAATTTTATA TAGAAGATGGGGAAGTTTATGAATACTCTTAA Protein sequence : MSVIILANNLCLQYQQNEPVIKHANLRIKRKDFVFISGPSGSGKSTLLRSFYGDLKLFSGKLEVCNINMNNASKATILDL RKNIGVVFQDYKLIQDYTIEQNIKLPMVICGVKKEECHLQLEKLLGHIDLRHKANRYPKELSGGEQQRVAMARAMANCPE LILADEPTGNLDDYSSDKIWSLLRGMNTQLNATIVVVTHKFPKNFSAYHRKFYIEDGEVYEYS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cur_1502 | YP_001800896.1 | cell division ATP-binding protein FtsE | Not tested | Not named | Protein | 1e-25 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lolD | YP_005785228.1 | lipoprotein ABC superfamily ATP binding cassette transporter, ABC protein | CP001581.1.gene798.p | Protein | 9e-22 | 43 |
