Gene Information

Name : rnhA (HPSNT_03405)
Accession : YP_005786821.1
Strain : Helicobacter pylori Santal49
Genome accession: NC_017376
Putative virulence/resistance : Unknown
Product : ribonuclease H
Function : -
COG functional category : -
COG ID : -
EC number : 3.1.26.4
Position : 701184 - 701615 bp
Length : 432 bp
Strand : +
Note : COG0328 Ribonuclease HI

DNA sequence :
ATGCAAGAAATTGAAATTTTTTGCGATGGCTCTTCTTTAGGCAATCCCGGGCCAGGCGGTTATGCGGCGATTTTACGCTA
TAAAGATAAAGAAAAAATCATCAGTGGAGGCGAATCATTCACCACGAATAACCGCATGGAATTAAGAGCACTCAATGAAG
CGTTAAAAATTTTGAAACGCCCATGCCGTATCACGCTTTATAGCGATTCGCAATACGTGTGCCAAGCGATCAATGTGTGG
CTGGCTAACTGGCAAAAAAAGAATTTTTCTAAAGTCAAAAATGTGGATTTATGGAAAGAATTTTTAAAAGTTTCTAAAGG
GCATTTGATTATGGCGGTTTGGATTAAGGGGCATAATGGGCATGCCGAGAACGAACGATGCGATAGCCTCGCTAAATTAG
AGGCACAAAAACGCACTAAAACGACCACTTAA

Protein sequence :
MQEIEIFCDGSSLGNPGPGGYAAILRYKDKEKIISGGESFTTNNRMELRALNEALKILKRPCRITLYSDSQYVCQAINVW
LANWQKKNFSKVKNVDLWKEFLKVSKGHLIMAVWIKGHNGHAENERCDSLAKLEAQKRTKTTT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 2e-28 52