Gene Information

Name : rnhA (HPPN120_03400)
Accession : YP_005788350.1
Strain : Helicobacter pylori Puno120
Genome accession: NC_017378
Putative virulence/resistance : Unknown
Product : ribonuclease H
Function : -
COG functional category : -
COG ID : -
EC number : 3.1.26.4
Position : 692074 - 692538 bp
Length : 465 bp
Strand : -
Note : COG0328 Ribonuclease HI

DNA sequence :
ATGCAAGAGATTGAAATTTTTTGCGATGGCTCTTCTTTAGGCAATCCCGGGCCAGGCGGTTATGCAGCGATTTTACGCTA
TAAAGATAAAGAAAAAATCATCAGTGGAGGCGAATCATTCACCACGAATAACCGCATGGAATTAAAAGCGCTCAATGAAG
CGTTAAAAATTTTGAAACGCCCATGCCATATCACGCTTTATAGCGATTCGCAATACGTGTGCCAAGCGATCAATGCGTGG
CTAACTAACTGGCAAAAAAAGAATTTTTCTAAAGTCAAAAATGTGGATTTGTGGAAAGAATTTTTAGAAGTTTCTAAAGG
GCATTTGATCATGGCTGTGTGGATCAAGGGGCATAATGGGCATGCCGAGAATGAACGCTGCGATAGCCTCGCTAAATTAG
AGGCGCAAAAACGGGTAAAAACGACCAAAGGGAAAAACGATGAAAAACAAACGCTCTCAAAATAG

Protein sequence :
MQEIEIFCDGSSLGNPGPGGYAAILRYKDKEKIISGGESFTTNNRMELKALNEALKILKRPCHITLYSDSQYVCQAINAW
LTNWQKKNFSKVKNVDLWKEFLEVSKGHLIMAVWIKGHNGHAENERCDSLAKLEAQKRVKTTKGKNDEKQTLSK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 1e-28 51