Gene Information

Name : cspE (EPYR_02702)
Accession : YP_005803453.1
Strain : Erwinia pyrifoliae DSM 12163
Genome accession: NC_017390
Putative virulence/resistance : Unknown
Product : cold shock-like protein cspE (CSP-E)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2770621 - 2770860 bp
Length : 240 bp
Strand : -
Note : 'Cold-shock' DNA-binding domain

DNA sequence :
GTGTCCATTTTTCATGTAAAGGTAATATTGATGTCTAAGATTAAAGGTAGCGTTAAGTGGTTTAATGAGTCCAAAGGATT
CGGTTTCATTACTCCTGAAGATGGTAGCAAAGATGTTTTCGTACACTTCTCTGCCATCCAGAGCAACGGTTTCAAAACTC
TGGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACCAACGGTGCCAAAGGCCCATCTGCTGCTAACGTTGCCGCTATTTAA

Protein sequence :
MSIFHVKVILMSKIKGSVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNGFKTLAEGQRVEFEITNGAKGPSAANVAAI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 1e-18 70
cspH YP_216241.1 cold shock protein-like protein Not tested SPI-11 Protein 2e-07 47