|
Name : dspF (EJP617_17150) Accession : YP_005818283.1 Strain : Erwinia sp. Ejp617 Genome accession: NC_017445 Putative virulence/resistance : Virulence Product : hrp/hrc Type III secretion system-Hrp elicitor/effector region-dsp protein B/F Function : - COG functional category : - COG ID : - EC number : - Position : 1896782 - 1897201 bp Length : 420 bp Strand : + Note : - DNA sequence : ATGACAGCGTCACAGCAGCAGGTTGAACGGTTTTTACAGTATTTTTCCGCCGGGTGTAAAACGCCTATTCATCTGAAAGA CGGGGTGTGCGCCCTGTATAATGAACAAAATGAGGAGGCGGCGGTGCTGGAAATACCGGAACACAGCGACAGCCTGTTGC TTCACTGCCAAATTATTGAGACCGACCCACAGACATCAATCACGCTGTATTCGATGTTATTGCAGCTAAATTTTGAGATG GCGGCCATGCGTGGCTGTTGGCTGGCGCTGGACGAACTGCACAATGTGCGTTTATGTTTTCAGCAGCCGCTGGAGCATCT GGATGAAGCGAGTTTTAGCGATATCGTTAGCGGCTTTATCGAACAGGCGGCAGAAGTACGTGAGTATATAGCACAATCAG ACGATAGTAGCGCGGCATAA Protein sequence : MTASQQQVERFLQYFSAGCKTPIHLKDGVCALYNEQNEEAAVLEIPEHSDSLLLHCQIIETDPQTSITLYSMLLQLNFEM AAMRGCWLALDELHNVRLCFQQPLEHLDEASFSDIVSGFIEQAAEVREYIAQSDDSSAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dspF | AAC04851.1 | DspF | Virulence | Hrp PAI | Protein | 1e-57 | 93 |
| unnamed | AAF71500.1 | unknown | Not tested | Hrp PAI | Protein | 2e-23 | 44 |
| shcE | NP_791203.1 | type III chaperone ShcE | Virulence | Hrp PAI | Protein | 3e-23 | 44 |
| avrF | AAT96351.1 | AvrF | Not tested | S-PAI | Protein | 5e-23 | 43 |
| avrF | AAT96271.1 | AvrF | Not tested | S-PAI | Protein | 3e-23 | 43 |
| avrF | AAT96312.1 | AvrF | Not tested | S-PAI | Protein | 3e-23 | 43 |
| avrF | ABA47300.1 | AvrF | Not tested | S-PAI | Protein | 2e-23 | 43 |
| avrF | AAT96165.1 | AvrF | Not tested | T-PAI | Protein | 9e-20 | 42 |
| avrF | AAT96219.1 | AvrF | Not tested | T-PAI | Protein | 9e-20 | 42 |
