Gene Information

Name : FN3523_1035 (FN3523_1035)
Accession : YP_005824089.1
Strain : Francisella novicida 3523
Genome accession: NC_017449
Putative virulence/resistance : Virulence
Product : ABC-type bacteriocin/lantibiotic exporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1047641 - 1049752 bp
Length : 2112 bp
Strand : -
Note : contain an N-terminal double-glycine peptidase domain

DNA sequence :
ATGCATAGTGGTATATTTTCTTTATATCAAATAGCTCATTTTAATAAGATAGCTATTGATCCTAAACAAATTGCTCATGA
ATATGCTGATGCAGATGGTAGTATTAGTGAAATCAACTTTTTAAGAGCTATAAAAGCAAATGGTTTCAAAGCGAAGTCAG
TTAGTATCAAAGTAGATTACTTAGACTCAAGGACATTTCCAATTATACTTAGAGATAATGATGGGGAATATTTTGTCTTA
GCAGCTATCAATCAAGAAAAATACTTAGTTATAGTCCAAGGGCAAAAAGATATCCAAAGCCTAACTAAACAAGAATTTTC
GCAGATATATTCAGGTGAAGCAATTTTAGTTACACATAAGGGTGTAGCAGAAAAAATAAATGAAAGCTTTAATATTAAAT
GGTTTATCCCAGCATTATGGAAATATAAACATATCTTCAAAGATGTAATTATTGCCTCATTATTTATCCAGCTATTTGGA
CTTATGACACCATTTTTCTTTCAGGTGGTGATGGATAAGGTAATTATGCATAATGGTATTACTACTTTAAATACATTAGC
AATAGTGTTTTTAGTAGTAGCTATTTTTGAAGTTATATTTGGTATGATTAGAACATATTTGTTTAGTCATACTACTTCTA
GAGTAGATGTAGTGCTTGGTTCTAAGCTTTTTAGCCATTTGATGCGCTTGCCATTAGAGTATTTTGAGGCAAGACAAGTT
GGGCAAAATGTAGCTAGAGTCAAAGAGTTAGATAGTATCCGTAATTTTATAACTAGTACAGCCCTTACATTATTAATTGA
TTTATCATTTACGTTTATATTTATAGCGGTATTATTTTTGTATAGTTGGCAGCTTACTTTAATAGTACTTGGAACTATCC
CAATCTATTTTTTATTATCAGTTTTTATCACACCAATACTCAAACATAGGTTGAATAAGGTTTTTTCAACTGGTGCAAAG
AACCAATCATTTCTTACAGAGTCAATTACGGGTATCCAGACTATCAAAGCAAATGCTATAGAGCCACAGATGCAAAGGAA
ATGGGAGGATAATCTTACTGAGTATGTCAAAGCATCTTTTAGATCACAAAATTTAGGTAATATAGCAGGTCAAACAGCAG
AACTTATAAATAAGTTAACAACTATAGCTATTATTTTTATAGGTGCTCATATGGTGATGTCAGGAAGACTCACGATAGGT
CAATTGATTGCATTTAATATGTTAGCAGGGCGTGTAACCCAGCCGATTCTTAAATTAGTCAATATATGGCAAGAGTTCCA
GCAGGCAGGAGTATCTTTAAAGAGATTGGGAGATATTCTTAACTATCCAACTGAGTCTTATAATAAGGTTAGTAAAAGTA
ATCTTCCTTTGTTTAGAGGAGCAGTTACATTCAAGGATGTTAAATTTAGATATTCAGCTGATACTAAGTTAATTCTTAAT
GAGTTAAATCTGGAAGTCCAAGCGGGACAAACAATAGGTATTGTAGGTAGGTCTGGAAGTGGCAAGAGTACACTTACTAA
ATTGATCCAAAGACTATATCGACCAGAATCAGGTAAGGTATTGGTAGATGGTGTTGACTTATCAACAGTTGATACTACAT
GGTTAAGGCAAAATATAGGAGTTGTCTTACAGGAGAGCTTTATGTTTAATCGTACTGTAAGAGAAAATATAGCTTTGACA
AATCCAAGTGCTAGTATGGAGCAAGTAGTAGCAGCTGCTAGATTTGCAGGAGCAGAAGAATTTATATTAGATCTCAAAGA
TGGTTTTGATACTGTAATAGAGGAGGGAGGTTCAAATTTTTCAGGAGGTCAAAAGCAAAGGTTATCAATAGCTCGAGCAT
TGATGAATAATCCCAAGATACTAATCCTTGATGAGGCTACATCAGCTCTTGATTATGAATCAGAAAAAATTATTCAGAAT
AATATGGCAAAAATATCACAAGGCAGAACAGTATTTATAATAGCCCATAGATTATCTACAGTACAAAATTGTGATCGTAT
TATCTATATGGATCAAGGTAAAATTATCGAGGATGGCTCACATCAAGAACTGTTAGCTAAGAATGGTCATTATGCTTCAT
TATATAACGCGCAACATCGAGGTGAAGTGTAA

Protein sequence :
MHSGIFSLYQIAHFNKIAIDPKQIAHEYADADGSISEINFLRAIKANGFKAKSVSIKVDYLDSRTFPIILRDNDGEYFVL
AAINQEKYLVIVQGQKDIQSLTKQEFSQIYSGEAILVTHKGVAEKINESFNIKWFIPALWKYKHIFKDVIIASLFIQLFG
LMTPFFFQVVMDKVIMHNGITTLNTLAIVFLVVAIFEVIFGMIRTYLFSHTTSRVDVVLGSKLFSHLMRLPLEYFEARQV
GQNVARVKELDSIRNFITSTALTLLIDLSFTFIFIAVLFLYSWQLTLIVLGTIPIYFLLSVFITPILKHRLNKVFSTGAK
NQSFLTESITGIQTIKANAIEPQMQRKWEDNLTEYVKASFRSQNLGNIAGQTAELINKLTTIAIIFIGAHMVMSGRLTIG
QLIAFNMLAGRVTQPILKLVNIWQEFQQAGVSLKRLGDILNYPTESYNKVSKSNLPLFRGAVTFKDVKFRYSADTKLILN
ELNLEVQAGQTIGIVGRSGSGKSTLTKLIQRLYRPESGKVLVDGVDLSTVDTTWLRQNIGVVLQESFMFNRTVRENIALT
NPSASMEQVVAAARFAGAEEFILDLKDGFDTVIEEGGSNFSGGQKQRLSIARALMNNPKILILDEATSALDYESEKIIQN
NMAKISQGRTVFIIAHRLSTVQNCDRIIYMDQGKIIEDGSHQELLAKNGHYASLYNAQHRGEV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlyB NP_755448.1 hemolysin B Virulence PAI I CFT073 Protein 0.0 50
hlyB CAD33760.1 hemolysin B Virulence PAI I 536 Protein 0.0 50
hlyB CAD42038.1 HlyB protein Virulence PAI II 536 Protein 0.0 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
FN3523_1035 YP_005824089.1 ABC-type bacteriocin/lantibiotic exporter VFG1501 Protein 0.0 50
FN3523_1035 YP_005824089.1 ABC-type bacteriocin/lantibiotic exporter VFG0907 Protein 0.0 50
FN3523_1035 YP_005824089.1 ABC-type bacteriocin/lantibiotic exporter VFG1557 Protein 0.0 50
FN3523_1035 YP_005824089.1 ABC-type bacteriocin/lantibiotic exporter VFG0841 Protein 2e-172 49
FN3523_1035 YP_005824089.1 ABC-type bacteriocin/lantibiotic exporter VFG1269 Protein 4e-174 48