Gene Information

Name : FNFX1_1607 (FNFX1_1607)
Accession : YP_005826514.1
Strain : Francisella novicida Fx1
Genome accession: NC_017450
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : 2.7.7.6
Position : 1672850 - 1676926 bp
Length : 4077 bp
Strand : -
Note : -

DNA sequence :
ATGTCTTACTCATACGCTGAGAAAAAAAGAATTCGTAAAGAGTTTGGGGTTCTTCCTCATATCTTAGATGTACCATATTT
GCTTTCTATTCAAACAGAGTCATACAAAAAATTCTTGACTGCAGATGCAGCAAAAGGAAGACTTCACTCTGGACTTGAAA
TAGTTTTAAAACAGTCTTTTCCTGTTGAGAGTAAAAATGGTCAATATGAACTTCACTATGTTGATTATCAAATTGGTGAG
CCTACTTTTGATGAAACTGAATGTCAGGTTCGTGGTGCTACTTACGATGCACCATTAAATGTGAAGTTAAGATTAGTTGT
ATATAATAAAGATGCTCTTCCAAATGAAAAAATTGTCGAGGACATTAGAGAAGAGTATGTGTACATGGGTGATATTCCGC
TAATGACAACTAATGGTACTTTTATCATTAATGGGACAGAAAGAGTGGTAGTCTCTCAGTTGCATAGATCACCAGGGGTG
TTCTTTAGTAAGGATGACTCTGAGGAAGGAGCATTCTCAGCACGTATTATCCCATATAGAGGTTCATGGCTTGATTTTGA
ATTTGACTCAAAGGGTATTATATGGGCTAGGATTGATAGAAAAAGAAAATTCTGTGCTACAGTTATTTTAAAAGCTCTTG
GTTATACTCAAGAGCAAATATTAGAGAATTTTTCTGAGACTAAGACTATTACTTTTAATAGTAAAGGTTTTGCTCTTAGA
CTTGATAACCTTTCAAATATGAAAGGTGAACTGCTTAAGTTTGACATTGTAGATGCTCAAGATAATGTTATTGTTAAAAA
GAATAAAAAATTAACTTCAAGAGATGTTAAGAAAATTAAAGATGCAGGCGTTGACTCTGTAGCTATTGATTTTGATTTGG
TCAGCACTCTTAGAGTTGCAAAAGATATCGTTAATGAAGCAACAGGTGAAGTGATAGCTTATGCTAATGACGATGTTACA
GAAAGTTTATTAGAGTCATGCGTAGAAGTTGGCATGCTTGAATTAGAAGTTATTGATTTTATAACTACTGAAAGAGGTAG
GTATATATCTGATACTTTAAAATATGATCTTACAAGAAATACTGATGAGGCACTTGTCGAGATATATAAGGTATTACGAC
CAGGTGATCCTCCTGCAGCAGCTTCAGTTAAAGCATTATTTGAAGGTTTATTCTTTATTGAAAGTAGATATAGCCTTTCT
GATATTGGTAGAATGAAGCTAAATGCTAGATTAGGTTCGGATAAGGTATCTAAAGATATTTATACTTTAGAAAATAATGA
TATAGTTGGCGTAATTGAAGAGCTTATAAATATCCGTGATGGTAAAGGTAAAGTTGATGATATTGATCATTTAGGTAACA
GACGTGTACGTTCTGTTGGCGAGATGGTTGAGAATCAGTTTAGAATAGGCCTCTACCGTGTAGAGAAAGGTATTCGTGAA
AGTATGTCTTTAGTACATAAAGATAAGCTTATGCCAAAAGATATCGTTAACTCGAAGCCAATCACAGCAGCAATTAAAGA
ATTCTTTACTTCTGGAGCGTTATCACAATTTATGGATCAAGATAACCCATTGTCAGAAGTTACACATAAGCGTAGAATAT
CTGCATTAGGTCCAGGTGGTTTATCACGTGATAGAGCAGGTTTTGAAGTACGTGATGTTCATGCAACACACTATGGTAGA
TTATGTCCAATTGAGACTCCAGAAGGTCCAAATATTGGTCTAATTAACTCATTAGCAAGTTATGCTCGTGTTAATGATTA
TGGTTTCTTAGAAGCGCCATATCGAAAAGTTGTTGATGGTAAGGTTACAGATGAAATTGAATACTTATCTGCTATCGATG
AAGATAATTATGTAATTGCTCAAGCATCAACTAAACTTGATGAAAATAACCATTTTGTTGAAGATCTTATTCAATGTCGT
TCTGGTGGTGAGGCAATATTTACTGAGTCAAGTAGAGTTCAGTATATGGATGTTTCTGCTAAACAGATGGTTTCAGCAGC
TGCGGCACTAATTCCTTTCCTTGAGCATGATGATGCTAACAGGGTATTGATGGGTGCAAACATGCAACGTCAAGCGGTAC
CGACTCTTAAATCTGAGAAGCCTTTAGTCGGTACAGGTATGGAGAAGATTGTTGCTAGAGATTCTGGTAATTGTATTATC
GCAAGAAATGCTGGTGAAGTGGCTGAAGTTGATTCTAACAGAATCGTTATTAAAGTAGATACTGAAAAATCACAAACTAG
TAATTTGGTTGATATTTATAGTTTAACTAAATTTAAACGCTCAAACAAAAACACTTGTATTAACCAGCGTCCAATAGTAA
ATGTGGGTGATAAAGTAGAAGCTGGTGATATTTTAGCGGATGGTTTTGCAACTGATTTTGGCGAATTGTCTCTAGGGCAT
AACTTGATGGTTGCTTTTATGCCATGGAATGGTTATAACTTTGAGGATTCGATCTTACTATCTGAAAGAATAGTAAAAGA
TGATAAGTATACTAGTATCCATATTGAAGAGTTCACATGTGTGGCTCGTGATACTAAGCTTGGTCCTGAAGAGATAACTG
CAGATATTCCAAATGTTAGTGAATCAAGTCTTGCTAAGCTTGATGAGTCAGGAATAGTTCATATTGGCGCTAATGTCGAA
GCTGGCGATATTTTGGTAGCTAAGATTACTCCAAAAGCTGAGCAACAACTAACTCCTGAAGAGAGACTACTTAGAGCAAT
CTTTAATGAAAAAGCATCAAATGTTGCTGATAGTTCATTAAGAATGCCAAGTGGTACTTCTGGTACGGTTATTAATGTTC
AAGTATTTGAGAATGACAAAGGCGGTAAAAGTAAGCGAGCGCTTAAGATTGAAAAAGAACTGATCGATAAAGCTCGTAAG
GATTTTGATGAGGAGTTTGCAGTAATTGAATCTGTAGTCAAATCATCAATTGAGCAAGAGGTTGTTGGTGCAAAAATCCA
AAAAGCAAAAGGTCTTAAAAAAGGTGCTATCCTTACAAAAGAATTTTTAGCAACGCTACCTTTCTCTAAATGGCTAGAAA
TTTCTTTTGAGGATGAGAAACTTGAAGAGAAAGTTCAAAATGCTAGAGAGTATTATGAGGAAGCTAAAATTGCAATAGAT
GCTAAATTTGAAGCTAAGAAAAAATCTATTACTCAGAGTAATGAGCTATCTCCAGGTGTGCTTAAGACTGTTAAAGTTTT
TGTTGCGATTAAAAAGCGTATCCAGCCAGGTGATAAGATGGCTGGTCGTCATGGTAACAAAGGTGTGGTTTCACGGGTAT
TACCGGTTGAAGATATGCCATATATGGAAGATGGTACTCCTGTAGACGTTTGTCTAAATCCTTTAGGTATCCCATCACGT
ATGAACATTGGGCAGATTTTAGAAGCACACTTAGGATTGGCTTCATATGGTTTAGGTAAAAAAATCGAAAAAACTCTAGA
GAAAACTAGAAAAGCAGCTGAACTAAGAAAGACTTTAGAAGAAGTATATAATAGCGTTGGCGATAAGAAAGTTAATCTTG
AGGCTTTAAATGACGAAGAGATACTAACTCTTTGTGACAACCTAAAAGGTGGAGTACCAATCGCTACACCAGTATTTGAT
GGTGCTAAAGAAGAAGACATTAAATCACTACTGAAAATAGGCGGCTTTGCAACTAATGGTCAGATGAAGCTTTTTGATGG
TCGTACTGGTAAGCCTTTTGATAGACATGTAACTGTTGGTTATATGTATATGCTAAAACTAGATCACTTAGTAGATGATA
AGATGCATGCAAGATCAACTGGCTCATATAGTCTAGTTACGCAGCAGCCATTAGGTGGTAAAGCACAGTTTGGTGGACAA
AGATTCGGTGAGATGGAAGTTTGGGCATTACAAGCATATGGTGCTGCTTATACATTAAGAGAGATGCTAACAGTTAAGTC
AGATGACATAGCAGGTAGATCTAAAATGTATAAGAATATAGTTGATGGTAAGTTGACTATGAATGTAGATGTTCCAGAAT
CATTCAATGTTTTAAGAAATGAAGTTAGAGCATTGGGTATAGATATGGATTTTGACTATTCATCTGAGGAAGAATAA

Protein sequence :
MSYSYAEKKRIRKEFGVLPHILDVPYLLSIQTESYKKFLTADAAKGRLHSGLEIVLKQSFPVESKNGQYELHYVDYQIGE
PTFDETECQVRGATYDAPLNVKLRLVVYNKDALPNEKIVEDIREEYVYMGDIPLMTTNGTFIINGTERVVVSQLHRSPGV
FFSKDDSEEGAFSARIIPYRGSWLDFEFDSKGIIWARIDRKRKFCATVILKALGYTQEQILENFSETKTITFNSKGFALR
LDNLSNMKGELLKFDIVDAQDNVIVKKNKKLTSRDVKKIKDAGVDSVAIDFDLVSTLRVAKDIVNEATGEVIAYANDDVT
ESLLESCVEVGMLELEVIDFITTERGRYISDTLKYDLTRNTDEALVEIYKVLRPGDPPAAASVKALFEGLFFIESRYSLS
DIGRMKLNARLGSDKVSKDIYTLENNDIVGVIEELINIRDGKGKVDDIDHLGNRRVRSVGEMVENQFRIGLYRVEKGIRE
SMSLVHKDKLMPKDIVNSKPITAAIKEFFTSGALSQFMDQDNPLSEVTHKRRISALGPGGLSRDRAGFEVRDVHATHYGR
LCPIETPEGPNIGLINSLASYARVNDYGFLEAPYRKVVDGKVTDEIEYLSAIDEDNYVIAQASTKLDENNHFVEDLIQCR
SGGEAIFTESSRVQYMDVSAKQMVSAAAALIPFLEHDDANRVLMGANMQRQAVPTLKSEKPLVGTGMEKIVARDSGNCII
ARNAGEVAEVDSNRIVIKVDTEKSQTSNLVDIYSLTKFKRSNKNTCINQRPIVNVGDKVEAGDILADGFATDFGELSLGH
NLMVAFMPWNGYNFEDSILLSERIVKDDKYTSIHIEEFTCVARDTKLGPEEITADIPNVSESSLAKLDESGIVHIGANVE
AGDILVAKITPKAEQQLTPEERLLRAIFNEKASNVADSSLRMPSGTSGTVINVQVFENDKGGKSKRALKIEKELIDKARK
DFDEEFAVIESVVKSSIEQEVVGAKIQKAKGLKKGAILTKEFLATLPFSKWLEISFEDEKLEEKVQNAREYYEEAKIAID
AKFEAKKKSITQSNELSPGVLKTVKVFVAIKKRIQPGDKMAGRHGNKGVVSRVLPVEDMPYMEDGTPVDVCLNPLGIPSR
MNIGQILEAHLGLASYGLGKKIEKTLEKTRKAAELRKTLEEVYNSVGDKKVNLEALNDEEILTLCDNLKGGVPIATPVFD
GAKEEDIKSLLKIGGFATNGQMKLFDGRTGKPFDRHVTVGYMYMLKLDHLVDDKMHARSTGSYSLVTQQPLGGKAQFGGQ
RFGEMEVWALQAYGAAYTLREMLTVKSDDIAGRSKMYKNIVDGKLTMNVDVPESFNVLRNEVRALGIDMDFDYSSEEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00346 YP_008207811.1 DNA-directed RNA polymerase, beta subunit/140 kD subunit Not tested AbaR25 Protein 0.0 58
BJAB0868_00350 YP_008211676.1 DNA-directed RNA polymerase, beta subunit/140 kD subunit Not tested AbaR26 Protein 0.0 58

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
FNFX1_1607 YP_005826514.1 hypothetical protein CP000034.1.gene3741. Protein 0.0 60
FNFX1_1607 YP_005826514.1 hypothetical protein CP001138.1.gene4362. Protein 0.0 60
FNFX1_1607 YP_005826514.1 hypothetical protein NC_002695.1.914942.p Protein 0.0 60
FNFX1_1607 YP_005826514.1 hypothetical protein CP000647.1.gene4402. Protein 0.0 60
FNFX1_1607 YP_005826514.1 hypothetical protein NC_002516.2.881699.p Protein 0.0 60
FNFX1_1607 YP_005826514.1 hypothetical protein CP001918.1.gene250.p Protein 0.0 59
FNFX1_1607 YP_005826514.1 hypothetical protein CP000675.2.gene392.p Protein 0.0 59
FNFX1_1607 YP_005826514.1 hypothetical protein CP004022.1.gene2794. Protein 0.0 58
FNFX1_1607 YP_005826514.1 hypothetical protein NC_009085.4918494.p0 Protein 0.0 58
FNFX1_1607 YP_005826514.1 hypothetical protein NC_011595.7060572.p0 Protein 0.0 58
FNFX1_1607 YP_005826514.1 hypothetical protein NC_010410.6003841.p0 Protein 0.0 58
FNFX1_1607 YP_005826514.1 hypothetical protein NC_011586.7046027.p0 Protein 0.0 58
FNFX1_1607 YP_005826514.1 hypothetical protein NC_010400.5987325.p0 Protein 0.0 58
FNFX1_1607 YP_005826514.1 hypothetical protein NC_010611.6233925.p0 Protein 0.0 58
FNFX1_1607 YP_005826514.1 hypothetical protein CP002695.1.gene18.p0 Protein 0.0 56
FNFX1_1607 YP_005826514.1 hypothetical protein NC_008702.1.4609796. Protein 0.0 56
FNFX1_1607 YP_005826514.1 hypothetical protein NC_011035.1.6448762. Protein 0.0 56
FNFX1_1607 YP_005826514.1 hypothetical protein AM180355.1.gene120.p Protein 0.0 46
FNFX1_1607 YP_005826514.1 hypothetical protein AE016830.1.gene3155. Protein 0.0 44
FNFX1_1607 YP_005826514.1 hypothetical protein CP003583.1.gene2745. Protein 0.0 44
FNFX1_1607 YP_005826514.1 hypothetical protein NC_012469.1.7686402. Protein 1e-180 42