Gene Information

Name : Hprae_0282 (Hprae_0282)
Accession : YP_005835599.1
Strain : Halanaerobium praevalens DSM 2228
Genome accession: NC_017455
Putative virulence/resistance : Virulence
Product : microcompartments protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 329017 - 329295 bp
Length : 279 bp
Strand : +
Note : COGs: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein; InterPro IPR000249:IPR020808; KEGG: amt:Amet_0260 microcompartments protein; PFAM: microcompartments protein; SPTR: Microcompartments protein; PFAM: BMC domain

DNA sequence : 
ATGGCAAATTCAAATGCATTAGGATTAATCGAAACAAGAGGTTTAGTTGGATCAGTAGAGGCAGCAGACGCAATGGTGAA
AGCAGCTAATGTTACTTTAATCGGTAAAGAGCATGTAGGTGGCGGACTTGTAACTGTTATGGTTAGAGGTGATGTTGGTG
CAGTTAAAGCAGCAACAGACGCTGGTGCAGCAGCAGCAGAAAGAGTTGGAGAATTAATTTCTGTTCATGTAATTCCAAGA
CCACACAATGAAGTTGAAATTATTTTACCACAAAAATAA

Protein sequence : 
MANSNALGLIETRGLVGSVEAADAMVKAANVTLIGKEHVGGGLVTVMVRGDVGAVKAATDAGAAAAERVGELISVHVIPR
PHNEVEIILPQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 5e-16 66
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 4e-16 63
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 9e-15 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Hprae_0282 YP_005835599.1 microcompartments protein VFG1596 Protein 2e-16 66
Hprae_0282 YP_005835599.1 microcompartments protein VFG1597 Protein 2e-16 63
Hprae_0282 YP_005835599.1 microcompartments protein VFG1598 Protein 4e-15 58