Gene Information

Name : Hprae_0289 (Hprae_0289)
Accession : YP_005835606.1
Strain : Halanaerobium praevalens DSM 2228
Genome accession: NC_017455
Putative virulence/resistance : Virulence
Product : microcompartments protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 332992 - 333285 bp
Length : 294 bp
Strand : +
Note : COGs: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein; InterPro IPR000249:IPR020808; KEGG: dal:Dalk_5001 microcompartments protein; PFAM: microcompartments protein; SPTR: Microcompartments protein; PFAM: BMC domain

DNA sequence : 
ATGGCTTCTAGAGAAGCATTAGGAAAAGTAGAAACAAGAGGTTTGGTAGCATCAATTGAAGCAGCAGATGCAATGGTTAA
AGCAGCAAATGTTACTTTAATTGGCAAAGAGTTAATTGGTAGTGGTTATGTAACAGTGATGGTTCGCGGAGATGTTGGTG
CAGTTAAAGCAGCTACAGATGCAGGTGCAGCTGCAGCAGCTAATATTGGAGAGTTAGTTTCTGTACATGTTATTCCAAGA
CCACACACTGAACTTGACGCAATTTTACCTCAAAGCCCTGAAAGTGCTGAGTAA

Protein sequence : 
MASREALGKVETRGLVASIEAADAMVKAANVTLIGKELIGSGYVTVMVRGDVGAVKAATDAGAAAAANIGELVSVHVIPR
PHTELDAILPQSPESAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 1e-13 65
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 3e-12 63
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 7e-12 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Hprae_0289 YP_005835606.1 microcompartments protein VFG1596 Protein 5e-14 65
Hprae_0289 YP_005835606.1 microcompartments protein VFG1597 Protein 1e-12 63
Hprae_0289 YP_005835606.1 microcompartments protein VFG1598 Protein 3e-12 63