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Name : LC40_0159 (LC40_0159) Accession : YP_005848314.1 Strain : Lactobacillus fermentum CECT 5716 Genome accession: NC_017465 Putative virulence/resistance : Virulence Product : Lysyl-tRNA synthetase (Lysine--tRNA ligase) (LysRS) Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 271836 - 273329 bp Length : 1494 bp Strand : + Note : - DNA sequence : ATGGCGAATGAAGAGCATTTGAACGACCAGATGGTGGTTCGACGTGAAAAGATGCAGGCATTAAGGGACCAAGGGGTGGC GCCGTTTGGTCACCGTTTTGATCCGGACCACGATTTATCCACGGATATCCGCAAGAAGTACGAAAACGATAGCGGTGAAC TACTGTTAGCCCAACACAACGTCGTAACGATTGCGGGACGGATGATCGGAAAACGGGGAAGCGGGAAGGCGTCCTTTGCC GACCTATTGGACCGGGGAGGCAAGATCCAATTCTACGTTCGCCAAGATATGGTGGGGGAAGAAGCCTACAAGCTATTCAA AGAATCCGACTTAGGGGATTTCTGGGGGATTACTGGTGATGTAATCAAAACCCGGATGGGCGAACTGACGGTGCGGGCCG AAAAGATTACCTTTTTATCCAAGGCCCTCCGTCCGCTGCCGGATAAGTACCACGGCTTGCAGGACCCAGAGTTAGTCTAC CGTCAGCGTTACTTGGACCTGATCACTAACCGGGAAAGCTTCGAACGTTTCCAAACCAGGACTAAGATTATTAAAGCCGT GCGCCGTTACATGGACGATAATGGCTTCTTAGAGGTGGAAACCCCCATCCTAGAAAACATTGCCTCCGGGGCTGAGGCGC GGCCGTTTGTGACCCACCACAACGCCTTAAACATTGATATGTACATGCGAATTGCCACCGAACTACGGCTTAAGCGCCTA ATTGTCGGCGGGATGGAACGAGTTTACGAACTGGGGCGGATCTTCCGTAACGAAGGGATGGACCCGTACCACAACCCTGA ATTCGATACGATGGAAACCTACGCCGCTTACTTCGACTTCAACGACGTGATGAAGGAAACGGAAGGGATTTTTAAGGCTG CCGCTGGTGTAGTTGCTGATGACTTAAAGATTACCTACCAAGGAACGGAACTCGATTTCAGTACCTCCTTTAAGCGTCTC CACATGGTGGATGCCATTAAGGAAGCAACGGGAATCGACTTCTGGCAAGAAATGACCGTTGAAGAGGCCCGTAAGCTGGC TGATGACAACGGAATTAAATACGAGAGTTGGTGGAAGGTTGGTCACATTATTAACGCCTTCTTTGAAGAAAAGGTTCAAG ATACCTTGGAACAACCGATTTTTATCTATGGTCACCCGGTAGAAGTCTCACCGTTAGCAAAGATTAACGAAGAGGATTCC CGTTTTACTGACCGGTTTGAACTGTACATTTTGGGTAAGGAATACGCGAATGCCTTCTCTGAATTAAACGACCCAATTGA TCAACGCAAGCGTTTTGAGGCACAAGCTCAAGAAAACGCTGAGGGTAACGATGAAGCCCAGCCGATTGACGAGGACTTTG TTGAAGCACTCGAATACGGGATGCCGCCTACCGGTGGGCTCGGGGTCGGAATCGACCGGATGGTAATGTTGATGACGGAC GCAAAGTCAATTCGCGACGTCTTATTATTCCCAACGATGCGACCAAAGAAGTAG Protein sequence : MANEEHLNDQMVVRREKMQALRDQGVAPFGHRFDPDHDLSTDIRKKYENDSGELLLAQHNVVTIAGRMIGKRGSGKASFA DLLDRGGKIQFYVRQDMVGEEAYKLFKESDLGDFWGITGDVIKTRMGELTVRAEKITFLSKALRPLPDKYHGLQDPELVY RQRYLDLITNRESFERFQTRTKIIKAVRRYMDDNGFLEVETPILENIASGAEARPFVTHHNALNIDMYMRIATELRLKRL IVGGMERVYELGRIFRNEGMDPYHNPEFDTMETYAAYFDFNDVMKETEGIFKAAAGVVADDLKITYQGTELDFSTSFKRL HMVDAIKEATGIDFWQEMTVEEARKLADDNGIKYESWWKVGHIINAFFEEKVQDTLEQPIFIYGHPVEVSPLAKINEEDS RFTDRFELYILGKEYANAFSELNDPIDQRKRFEAQAQENAEGNDEAQPIDEDFVEALEYGMPPTGGLGVGIDRMVMLMTD AKSIRDVLLFPTMRPKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 3e-109 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| LC40_0159 | YP_005848314.1 | Lysyl-tRNA synthetase (Lysine--tRNA ligase) (LysRS) | VFG1668 | Protein | 2e-109 | 45 |
