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Name : lysS (LBHH_0266) Accession : YP_005849486.1 Strain : Lactobacillus helveticus H10 Genome accession: NC_017467 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 286451 - 288001 bp Length : 1551 bp Strand : + Note : - DNA sequence : TTGGCAAAGAACGAAATGAATGACCAATTACGTGTTCGTCGTCAAAAGATGGACGAAATGCGTGAAAACGGAATTGAACC ATTCGGTCAAAGAAAGTTTGATCGTCAAGATTTGGCAAGTACTTTGGAAGAAAAGTATGGTAAAGAAGATGAAGACGAAT TAAACGATGATATGCCTAAGACTAAGATTGCAGGTCGTATGCTTGCAAAACGTGGTAAGGGTAAAGTAGGTTTTGCAGAC CTTTACGACCGTACTGGTAAGATTCAAATTTATGTACGTAAAGACATCGTAGGCGAAGACAACTACAAGATCTTCAAGAA GTCAGATATTGGTGATTTCTTGGGTATTGATGGGGAAGTTATGAAAACCGATACTGGTGAGTTGACTATTCGTGCTACTC ACGTAACCTTCTTATCTAAGGCTCTTCGTCCTTTGCCAGACAAGTACCACGGCTTGAAGGATGTTGAAGCAATCTACCGT CAACGTTACCTTGACTTGATTACTAATCGCGATAGCTACATGCGTTTTGTTCACCGTACTCAAATTATCCAAGCTATTCG TGATTACTTGAATAAGCAAAACTTCTTGGAAGTTGAAACTCCAGTATTGCACAACATTCCAGGTGGTGCTGAAGCTCGTC CATTTATTACTCACCACAACGCTTTGGATATTGACCTTTACATGAGAATTGCTTTGGAACTTCCACTGAAGCGTTTGATT GTTGGTGATATGGAACGTGTTTACGAAATCGGTCGTGTATTCAGAAACGAAGGTTTGGACACTCACCACAACCCAGAATT TACTGAACTTGAAAGTTATGCTGCATACTGGGACTTCCACGATGTTATGGACGAAGCAGAAGGCATTATTCGTGCTGCAG CTAAGGTTGTTTCAGATGATGGCAAGATTACTTACCAAGGTCAAGACATTGACTTAGGCAAGCCATTCCGTCGCATTCAC ATGGTTGATTTAATCAAGGAAAAGACCGGCGTTGATTTCTGGAAGCCAATGACTCTTGAAGAAGCAACTAAGATTGCTGA AGATCACGATATTCATGTTGAAAAGTTCTGGAAGGTTGGCCACATTATTAACGCCTTCTTTGAAAAGTACTGTGAAGAAA CTATTGTTGACCCAACATTTGTTTACGGTCACCCAGTAGAAATTTCACCACTTGCTAAGAAGAATGCTGACGATCCAAGA TTTACTGACCGTTTCGAAATTTACATCATGGGTGAAGAATACGGTAACGCCTTCTCAGAATTGAACGATCCTGATGATCA ACGTGCTCGTTTCGAAGCTCAAATGGAAGAACGTGAAGCAGGTAACGATGAAGCTGATATGATTGATGAAGATTACCTTC GTGCTATGGAATATGGTATGCCACCTACAGGTGGTTTGGGTATCGGCATTGACCGTTTGGTAATGCTTTTGACTGATGCT CCAGCTATTCGTGATGTTTTGCTCTTCCCAACAATGCGTCCAGAACGTGTTGAATCAATTGATGCCGAAGTTAAGGCTGA TTTAGCTAAGAAGAATAAAGAAAACAAGTAG Protein sequence : MAKNEMNDQLRVRRQKMDEMRENGIEPFGQRKFDRQDLASTLEEKYGKEDEDELNDDMPKTKIAGRMLAKRGKGKVGFAD LYDRTGKIQIYVRKDIVGEDNYKIFKKSDIGDFLGIDGEVMKTDTGELTIRATHVTFLSKALRPLPDKYHGLKDVEAIYR QRYLDLITNRDSYMRFVHRTQIIQAIRDYLNKQNFLEVETPVLHNIPGGAEARPFITHHNALDIDLYMRIALELPLKRLI VGDMERVYEIGRVFRNEGLDTHHNPEFTELESYAAYWDFHDVMDEAEGIIRAAAKVVSDDGKITYQGQDIDLGKPFRRIH MVDLIKEKTGVDFWKPMTLEEATKIAEDHDIHVEKFWKVGHIINAFFEKYCEETIVDPTFVYGHPVEISPLAKKNADDPR FTDRFEIYIMGEEYGNAFSELNDPDDQRARFEAQMEEREAGNDEADMIDEDYLRAMEYGMPPTGGLGIGIDRLVMLLTDA PAIRDVLLFPTMRPERVESIDAEVKADLAKKNKENK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 8e-110 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_005849486.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 5e-110 | 47 |
