Gene Information

Name : ycdB (CVCAS_0214)
Accession : YP_005867616.1
Strain : Lactococcus lactis CV56
Genome accession: NC_017486
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 219065 - 219781 bp
Length : 717 bp
Strand : +
Note : -

DNA sequence :
ATGGGACGTAAATGGGCCAATATTGTTGCTAAAAAAACCGCTAAAGACGGTGCAACTTCTAAAGTATATGCAAAATTCGG
TGTTGAAATCTATGCCGCTGCTAAACAAGGTGAACCAGATCCAGAATCAAATTCATCATTAAAATTCGTTATTGAACGTG
CCAAACAAGCGCAAGTTCCAAAACACGTTATTGATAAAGCAATCGATAAAGCCAAAGGTGGTGGTGATGAAACTTTCGTT
CAAGGACGTTATGAAGGATTTGGACCAAATGGTTCAATGGTTATCGCCGAAACTTTGACTTCAAATGTTAACCGTACAAT
CGCTAATGTCCGTACTACTTTCCACAAAAATGGTGGGAATATCGGAGCAGCCGGTGCTGTCAGCTATATGTTTGACAATA
CAGGGGTGATTGTTTTTGAAGGAACTGACCCTGACCATATCTTTGAAATTTTGCTTGATGCTGAAGTTGATGTTCATGAT
GTGACCGAAGAAGAAGGAAATATTGTTGTTTATACAGAACCAACAGACCTTCATAAAGGAATTGCAGCACTTAAAGAAGC
TGGAATTACTGAGTTCTCAACAACAGAATTAGAAATGATTCCTCAATCAGAAGTTGAACTTTCACCTGAAGATTTAGAAA
TCTTTGAAGGACTCATTGATGCTCTTGAAGATGACGATGACGTCCAAAAAGTTTATCATAACGTTGCAAATCTCTAA

Protein sequence :
MGRKWANIVAKKTAKDGATSKVYAKFGVEIYAAAKQGEPDPESNSSLKFVIERAKQAQVPKHVIDKAIDKAKGGGDETFV
QGRYEGFGPNGSMVIAETLTSNVNRTIANVRTTFHKNGGNIGAAGAVSYMFDNTGVIVFEGTDPDHIFEILLDAEVDVHD
VTEEEGNIVVYTEPTDLHKGIAALKEAGITEFSTTELEMIPQSEVELSPEDLEIFEGLIDALEDDDDVQKVYHNVANL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_1069 YP_853086.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 2e-103 94