Gene Information

Name : LCGL_0465 (LCGL_0465)
Accession : YP_005870209.1
Strain : Lactococcus garvieae Lg2
Genome accession: NC_017490
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 479984 - 480772 bp
Length : 789 bp
Strand : +
Note : -

DNA sequence : 
ATGCTATTAGAAGTTAAACATATCAAAAAAGTTTTCAAAACACGCTTTTCAAAAGAAGAAACAACAGCTCTTGCGGACAT
CGATTTTTCTGTCGAAGAAGGTGAATACATTGCCATTATGGGTGAATCAGGTTCAGGTAAAACAACACTCTTGAATATTT
TATCAACTTTGGAAAAACCCACAGCTGGTCAAGTTTTACTTTCAGGACGTGACATTACAGCTATTAAAGACAAGGACATC
TCAGCATTCCGCCGTGAGCACCTTGGCTTTGTCTTCCAAGACTTCAACCTCTTGGACACGCTATCTGTAAGAGACAATAT
TTACCTGCCAATGGTTCTTTCGAAAGCGCCAGTAAAGAAGATGAAAGCACGTTTGGAAAACTTAGCGCCCAAGTTGAATA
TTGAAACCCTTTTAGAAAAACAACCTTTTGAGCTATCTGGGGGACAAAAACAGCGTGTTGCTGTTGCGCGTGCTCTGATT
TCTCAACCCGATCTTGTTTTGGCAGATGAGCCAACAGCAGCCTTGGACTATAAAAACTCTGAAAGTTTGCTTGAGCTTTT
CGAAAATATCAATGATGCTGGGCAAACCATTATCATGGTTACTCACTCAAGCCTAGCTGCAAGTCACGCAAAACGTGTTC
TCTTTATTAAAGACGGAATGCTTTATCATCAGCTTTATCGTGGCGATAAGTCATCCACAGAGTTTGCAAAAGAAATTACC
TTGTCAATGACTTCATTCTTGGGGGCTTCGACAGACCCAACTGAAACGGAGGTAGCCAATAATGCTTAG

Protein sequence : 
MLLEVKHIKKVFKTRFSKEETTALADIDFSVEEGEYIAIMGESGSGKTTLLNILSTLEKPTAGQVLLSGRDITAIKDKDI
SAFRREHLGFVFQDFNLLDTLSVRDNIYLPMVLSKAPVKKMKARLENLAPKLNIETLLEKQPFELSGGQKQRVAVARALI
SQPDLVLADEPTAALDYKNSESLLELFENINDAGQTIIMVTHSSLAASHAKRVLFIKDGMLYHQLYRGDKSSTEFAKEIT
LSMTSFLGASTDPTETEVANNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LCGL_0465 YP_005870209.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 2e-40 47
LCGL_0465 YP_005870209.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 1e-39 43
LCGL_0465 YP_005870209.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 3e-40 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LCGL_0465 YP_005870209.1 ABC transporter ATP-binding protein VFG2059 Protein 4e-19 42