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Name : secD (NMV_1805) Accession : YP_005879074.1 Strain : Neisseria meningitidis 8013 Genome accession: NC_017501 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : - COG ID : - EC number : - Position : 1737770 - 1739626 bp Length : 1857 bp Strand : - Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type t : transporter DNA sequence : ATGATGAACCGTTATCCTTTATGGAAATATCTGCTGATTGTGTTCACGATTGCGGTTGCCGCAGTGTATTCGCTGCCCAA CCTATTCGGCGAAACACCCGCCGTGCAGGTATCGACCAACCGACAAGCCATCATCATCAACGAACAGACTCAATTCAAAG TGGATGCCGCGCTGAAAAACGCAGGTATTCAGACCGACGGGATGTTTGTTGTGGACAATTCACTGAAAGTGCGTTTCAAA GACACAGAAACGCAGCTTAAAGCGCGCGACGTCATCGAAAACACTTTGGGCGAAGGGTATATTACCGCGCTCAACCTGTT GGCGGACAGCCCCGAATGGATGGCGAAAATCAAAGCCAATCCGATGTTTTTGGGTTTGGACTTGCGCGGCGGCGTGCATT TCACCATGCAGGTCGATATGAAAGCGGCGATGCAGAAAACGTTTGAACGTTATTCGGGCGACATCCGCCGCGAACTGCGC CGCGAAAAAATCCGCAGCGGCACGGTGCGTCAGGCTGGAAACAGCCTGACCGTCCCTTTGCAGGATGCAGGTGATGTGCA AAAGGCTCTGCCGCAGTTGCGCAAGCTGTTTCCTGAAGCAACGCTGAATTCAGACGGCAGCAATATCGTCTTGACGCTTT CGGAAGAGGCGGTCAATAAAGTGCGTTCCGATGCGGTCAAACAGAACATCACTACCCTGCACAACCGTGTGAACGAGTTG GGCGTGGCCGAACCCGTCATCCAGCAGTCCGGTGCCGACCGTATCGTCGTGCAGCTTCCGGGCGTTCAGGATACTGCCAA GGCAAAAGACATCATCGGCCGTACCGCGACTTTGGAATTGCGTATGGTGGAGGACGATCCTGCCAAGTTGCGCGAGGCAT TGGAAGGCAACGTGCCGAGCGGTTATGAGCTGCTTTCAAGCGGCGGAGATCGTCCCGAAATTCTGCTGATCAGCAAACAG GTCGAGCTGACGGGCGACAACATCAACGATGCGCAACCGAGTTTCGACCAAATGGGCGCACCTGCCGTCAGTCTGAGCTT GGACAGCGCGGGTGGCAGCATTTTCGGCGAACTGACTGCCGCAAATGTCGGCAAACGCATGGCGATGGTTTTGATCGACC AAGGAAAATCCGAGGTTGTAACCGCGCCGGTTATCCGTACTGCCATTACAGGCGGACGCGTGGAAATTTCCGGAAGCATG ACGACAGCCGAAGCCAATGATACGTCTTTGCTGTTGCGTGCCGGTTCTCTTGCCGCACCGATGCAGATTGTCGAAGAACG TACCATCGGTCCGTCTTTGGGTAAGGAGAACATCGAAAAAGGCTTCCATTCGACTTTATGGGGTTTTGCCATCGTTGCTG CATTCATGGTGGTTTACTATCGTCTGATGGGTTTCTTTTCTACCATTGCATTGAGTGCCAACATACTGTTCCTAATCGGT ATTTTGTCTGCTATGCAGGCAACGTTGACGTTACCGGGTATGGCCGCGCTGGCGTTGACTTTGGGTATGGCAATCGACTC CAACGTCTTGATTAACGAACGTATCCGCGAAGAATTGCGTGTCGGCGTGCCGCCGCAGCAGGCAATCAATCTCGGTTTCC AACACGCATGGGCGACCATTGTCGATTCCAACCTGACTTCGCTGATTGCCGGTATCGCGCTTTTGGTATTCGGTTCCGGC CCGGTACGCGGTTTTGCGGTCGTACACTGTTTGGGTATTCTGACTTCGATGTATTCGTCCGTCGTCGTATTCCGTGCGTT GGTCAATCTGTGGTACGGACGCAGACGCAAATTGCAGAATATTTCCATCGGTGCGGTATGGAAACCTGAAGCCGAAACTG CGGCAGGTAAGGAGTAA Protein sequence : MMNRYPLWKYLLIVFTIAVAAVYSLPNLFGETPAVQVSTNRQAIIINEQTQFKVDAALKNAGIQTDGMFVVDNSLKVRFK DTETQLKARDVIENTLGEGYITALNLLADSPEWMAKIKANPMFLGLDLRGGVHFTMQVDMKAAMQKTFERYSGDIRRELR REKIRSGTVRQAGNSLTVPLQDAGDVQKALPQLRKLFPEATLNSDGSNIVLTLSEEAVNKVRSDAVKQNITTLHNRVNEL GVAEPVIQQSGADRIVVQLPGVQDTAKAKDIIGRTATLELRMVEDDPAKLREALEGNVPSGYELLSSGGDRPEILLISKQ VELTGDNINDAQPSFDQMGAPAVSLSLDSAGGSIFGELTAANVGKRMAMVLIDQGKSEVVTAPVIRTAITGGRVEISGSM TTAEANDTSLLLRAGSLAAPMQIVEERTIGPSLGKENIEKGFHSTLWGFAIVAAFMVVYYRLMGFFSTIALSANILFLIG ILSAMQATLTLPGMAALALTLGMAIDSNVLINERIREELRVGVPPQQAINLGFQHAWATIVDSNLTSLIAGIALLVFGSG PVRGFAVVHCLGILTSMYSSVVVFRALVNLWYGRRRKLQNISIGAVWKPEAETAAGKE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 7e-95 | 41 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 5e-95 | 41 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 5e-95 | 41 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 5e-95 | 41 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 4e-95 | 41 |
