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Name : secD (NMBH4476_1583) Accession : YP_005900216.1 Strain : Neisseria meningitidis H44/76 Genome accession: NC_017516 Putative virulence/resistance : Unknown Product : protein-export membrane protein SecD Function : - COG functional category : - COG ID : - EC number : - Position : 1666397 - 1668250 bp Length : 1854 bp Strand : - Note : - DNA sequence : ATGAACCGTTATCCTTTATGGAAATATCTGCTGATTGTGTTCACGATTGCGGTTGCCGCAGTGTATTCGCTGCCCAACCT ATTCGGCGAAACACCCGCCGTGCAGGTATCGACCAACCGACAAGCCATCATCATCAACGAACAGACTCAATTCAAAGTGG ATGCCGCGCTGAAAAACGCAGGTATTCAGACCGACGGGATGTTTGTTGTGGACAATTCACTGAAAGTGCGTTTCAAAGAC ACAGAAACGCAGCTTAAAGCGCGCGACGTCATCGAAAACACTTTGGGCGAAGGGTATATTACCGCGCTCAACCTGTTGGC GGACAGCCCCGAATGGATGGCGAAAATCAAAGCCAATCCGATGTTTTTGGGTTTGGACCTGCGCGGCGGCGTGCATTTCA CCATGCAGGTCGATATGAAAGCGGCGATGCAGAAAACGTTTGAACGTTATTCGGGCGACATCCGCCGCGAACTGCGCCGC GAAAAAATCCGCAGCGGCACGGTGCGTCAGGCTGGAAACAGCCTGACCGTCCCTTTGCAGGATGCAGGTGATGTGCAAAA GGCTCTGCCGCAGTTGCGCAAGCTGTTTCCTGAAGCAACGCTGAATTCAGACGGCAGCAATATCGTCTTGACGCTTTCGG AAGAGGCGGTCAATAAAGTGCGTTCCGATGCGGTCAAACAGAACATCACTACCCTGCACAACCGTGTGAACGAGTTGGGC GTGGCCGAGCCCGTCATCCAGCAGTCCGGTGCAGACCGTATCGTCGTGCAGCTTCCGGGCGTTCAGGATACTGCCAAGGC AAAAGACATCATCGGCCGTACCGCGACTTTGGAATTGCGTATGGTGGAGGACGATCCTGCCAAGTTGCGCGAGGCATTGG AAGGCAACGTGCCGAGCGGTTATGAGCTGCTTTCAAGCGGCGGAGATCGTCCCGAAATTCTGCTGATCAGCAAACAGGTC GAGCTGACGGGCGACAACATCAACGATGCGCAACCGAGTTTCGACCAAATGGGCGCACCTGCCGTCAGTCTGAGCTTGGA CAGCGCGGGCGGCAGCATTTTCGGCGAACTGACTGCCGCAAATGTCGGCAAACGCATGGCGATGGTTTTGATCGACCAAG GAAAATCCGAGGTTGTAACCGCGCCGGTTATCCGTACTGCCATTACCGGCGGACGCGTGGAAATTTCCGGAAGCATGACG ACAGCCGAAGCCAATGATACGTCTTTGCTGTTGCGTGCCGGTTCTCTTGCCGCACCGATGCAGATTGTCGAAGAACGTAC CATCGGTCCGTCTTTGGGTAAGGAGAACATCGAAAAAGGCTTCCATTCGACTTTATGGGGTTTTGCCATCGTTGCTGCAT TCATGGTGGTTTACTATCGTCTGATGGGTTTCTTTTCTACCATTGCATTGAGTGCCAACATACTGTTCCTAATCGGTATT TTGTCTGCCATGCAGGCAACGTTGACGTTACCGGGTATGGCCGCGCTGGCGTTGACTTTGGGTATGGCAATCGACTCCAA CGTCTTGATTAACGAACGTATCCGCGAAGAATTGCGTGCCGGCGTGCCGCCGCAGCAGGCAATCAATCTCGGTTTCCAAC ACGCATGGGCGACCATTGTCGATTCGAACCTGACTTCGCTGATTGCCGGTATCGCGCTTTTGGTATTCGGTTCCGGCCCG GTACGCGGTTTTGCGGTCGTACACTGTTTGGGTATTCTGACTTCGATGTATTCATCCGTCGTCGTATTCCGTGCGTTGGT CAATCTGTGGTACGGACGCAGACGCAAATTGCAGAATATTTCCATTGGTTCGGTGTGGAAGCCGAAAGCCGAAATGGCAG GAGGCAAGGAGTAA Protein sequence : MNRYPLWKYLLIVFTIAVAAVYSLPNLFGETPAVQVSTNRQAIIINEQTQFKVDAALKNAGIQTDGMFVVDNSLKVRFKD TETQLKARDVIENTLGEGYITALNLLADSPEWMAKIKANPMFLGLDLRGGVHFTMQVDMKAAMQKTFERYSGDIRRELRR EKIRSGTVRQAGNSLTVPLQDAGDVQKALPQLRKLFPEATLNSDGSNIVLTLSEEAVNKVRSDAVKQNITTLHNRVNELG VAEPVIQQSGADRIVVQLPGVQDTAKAKDIIGRTATLELRMVEDDPAKLREALEGNVPSGYELLSSGGDRPEILLISKQV ELTGDNINDAQPSFDQMGAPAVSLSLDSAGGSIFGELTAANVGKRMAMVLIDQGKSEVVTAPVIRTAITGGRVEISGSMT TAEANDTSLLLRAGSLAAPMQIVEERTIGPSLGKENIEKGFHSTLWGFAIVAAFMVVYYRLMGFFSTIALSANILFLIGI LSAMQATLTLPGMAALALTLGMAIDSNVLINERIREELRAGVPPQQAINLGFQHAWATIVDSNLTSLIAGIALLVFGSGP VRGFAVVHCLGILTSMYSSVVVFRALVNLWYGRRRKLQNISIGSVWKPKAEMAGGKE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 1e-94 | 41 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 1e-94 | 41 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 9e-95 | 41 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 2e-94 | 41 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 1e-94 | 41 |
