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Name : secD (NMBNZ0533_0651) Accession : YP_005903275.1 Strain : Neisseria meningitidis NZ-05/33 Genome accession: NC_017518 Putative virulence/resistance : Unknown Product : protein-export membrane protein SecD Function : - COG functional category : - COG ID : - EC number : - Position : 708486 - 710342 bp Length : 1857 bp Strand : + Note : - DNA sequence : ATGATGAACCGTTATCCTTTATGGAAATATCTGCTGATTGTGTTCACGATTGCGGTTGCCGCAGTGTATTCGCTGCCCAA CCTATTCGGCGAAACACCCGCCGTGCAGGTATCGACCAACCGACAAGCCATCATCATCAACGAACAGACTCAATTCAAAG TGGATGCCGCGCTGCAAAACGCGGGTATTCAGACCGACGGGATGTTTGTTGTGGACAATTCACTGAAAGTGCGTTTCAAA GACACCGAAACGCAGCTTAAAGCGCGCGACGTCATCGAAAACACTTTGGGCGAAGGGTATATTACCGCGCTCAACCTGTT GGCGGACAGCCCCGAATGGATGGCGAAAATCAAAGCCAATCCGATGTTTTTGGGTTTGGACTTGCGCGGCGGCGTGCATT TCACCATGCAGGTCGATATGAAAGCGGCGATGCAGAAAACGTTTGAACGTTATTCGGGCGACATCCGCCGCGAACTGCGC CGCGAAAAAATCCGCAGCGGCACGGTGCGTCAGGCTGGAAACAGCCTGACCGTCCCTTTGCAGGATGCAGGTGATGTGCA AAAGGCTCTGCCGCAGTTGCGCAAGCTGTTTCCTGAAGCAACGCTGAATTCAGACGGCAGCAATATCGTCTTGACGCTTT CGGAAGAGGCGGTCAATAAAGTGCGTTCCGATGCGGTCAAACAGAACATCACTACCCTGCACAACCGTGTGAACGAGTTG GGCGTGGCCGAACCCGTCATCCAGCAGTCCGGTGCCGACCGTATCGTCGTGCAGCTTCCGGGCGTTCAGGATACTGCCAA GGCAAAAGACATCATCGGCCGTACCGCGACTTTGGAATTGCGTATGGTGGAGGACGATCCTGCCAAGTTGCGCGAGGCAT TGGAAGGCAACGTGCCGAGCGGTTATGAGCTGCTTTCAAGCGGCGGAGATCGTCCCGAAACTCTGCTAATCAGCAAACAG GTCGAGCTGACGGGCGACAACATCAACGATGCGCAACCGAGTTTCGACCAAATGGGCGCACCTGCCGTCAGTCTGAGCTT GGACAGCGCGGGTGGCAGCATTTTTGGCGAACTGACTGCCGCAAATGTCGGCAAACGCATGGCGATGGTTTTGATCGACC AAGGAAAATCCGAGGTTGTAACCGCGCCGGTTATCCGTACTGCCATTACCGGCGGACGCGTGGAAATTTCCGGAAGCATG ACGACAGCCGAAGCCAATGATACGTCTTTGCTGTTGCGTGCCGGTTCTCTTGCCGCGCCGATGCAGATTGTCGAAGAACG TACCATCGGTCCGTCTTTGGGTAAGGAGAACATCGAAAAAGGCTTCCATTCGACTTTATGGGGTTTTGCCATCGTTGCTG CATTCATGGTGGTTTACTATCGTCTGATGGGTTTCTTTTCTACCATTGCATTGAGTGCCAACATACTGTTCCTAATCGGT ATTTTGTCTGCCATGCAGGCAACGTTGACGTTACCGGGTATGGCCGCGCTGGCGTTGACTTTGGGTATGGCAATCGACTC CAACGTCTTGATTAACGAACGTATCCGCGAAGAATTGCGTGCCGGCGTGCCGCCGCAGCAGGCAATCAATCTCGGTTTCC AACACGCATGGGCGACCATTGTCGATTCCAACCTGACTTCGCTGATTGCCGGTATCGCGCTTTTGGTATTCGGTTCCGGC CCGGTACGCGGTTTTGCGGTCGTACACTGTTTGGGTATTCTGACTTCGATGTATTCCTCCGTCGTCGTATTCCGTGCGTT GGTCAATCTGTGGTACGGACGCAGACGCAAATTGCAGAATATTTCCATCGGTGCGGTATGGAAACCTGAAGCCGAAACTG CGGCAGGTAAGGAGTAA Protein sequence : MMNRYPLWKYLLIVFTIAVAAVYSLPNLFGETPAVQVSTNRQAIIINEQTQFKVDAALQNAGIQTDGMFVVDNSLKVRFK DTETQLKARDVIENTLGEGYITALNLLADSPEWMAKIKANPMFLGLDLRGGVHFTMQVDMKAAMQKTFERYSGDIRRELR REKIRSGTVRQAGNSLTVPLQDAGDVQKALPQLRKLFPEATLNSDGSNIVLTLSEEAVNKVRSDAVKQNITTLHNRVNEL GVAEPVIQQSGADRIVVQLPGVQDTAKAKDIIGRTATLELRMVEDDPAKLREALEGNVPSGYELLSSGGDRPETLLISKQ VELTGDNINDAQPSFDQMGAPAVSLSLDSAGGSIFGELTAANVGKRMAMVLIDQGKSEVVTAPVIRTAITGGRVEISGSM TTAEANDTSLLLRAGSLAAPMQIVEERTIGPSLGKENIEKGFHSTLWGFAIVAAFMVVYYRLMGFFSTIALSANILFLIG ILSAMQATLTLPGMAALALTLGMAIDSNVLINERIREELRAGVPPQQAINLGFQHAWATIVDSNLTSLIAGIALLVFGSG PVRGFAVVHCLGILTSMYSSVVVFRALVNLWYGRRRKLQNISIGAVWKPEAETAAGKE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 1e-95 | 41 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 2e-95 | 41 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 1e-95 | 41 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 1e-95 | 41 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 1e-95 | 41 |
