Gene Information

Name : pduA (lmo4a_1134)
Accession : YP_005926127.1
Strain : Listeria monocytogenes L99
Genome accession: NC_017529
Putative virulence/resistance : Virulence
Product : propanediol utilization protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1141920 - 1142207 bp
Length : 288 bp
Strand : +
Note : Carbon dioxide concentrating mechanism/carboxysome shell protein

DNA sequence : 
ATGCAAGAAGCACTAGGCTTAGTTGAAACTAAAGGGCTAGTCGGCGCCATTGAAGCCGCTGACGCCATGGTTAAATCAGC
TAACGTAACATTAACAGGGTACGAAAAAATCGGGTCTGGACTGGTTACTGTCATGGTTCGTGGCGATGTTGGTGCAGTGA
AAGCAGCGACAGAAGCAGGAGCAGCGGCAGCAAGAAATGTAGGTACCGTGATGAGTACACATGTTATTCCTCGTCCGCAT
ACTGATGTGGAAGAAATTTTACCAGTGAGGGTGAAGTCAGATGAGTGA

Protein sequence : 
MQEALGLVETKGLVGAIEAADAMVKSANVTLTGYEKIGSGLVTVMVRGDVGAVKAATEAGAAAARNVGTVMSTHVIPRPH
TDVEEILPVRVKSDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 5e-17 67
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 7e-16 64
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 7e-16 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pduA YP_005926127.1 propanediol utilization protein VFG1596 Protein 2e-17 67
pduA YP_005926127.1 propanediol utilization protein VFG1598 Protein 3e-16 64
pduA YP_005926127.1 propanediol utilization protein VFG1597 Protein 3e-16 62