Gene Information

Name : ccmE (PPUBIRD1_1528)
Accession : YP_005929405.1
Strain : Pseudomonas putida BIRD-1
Genome accession: NC_017530
Putative virulence/resistance : Unknown
Product : CcmE
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1707859 - 1708314 bp
Length : 456 bp
Strand : +
Note : Cytochrome c-type biogenesis protein ccmE

DNA sequence :
GTGAATCCGCAGCGCAAGAAACGCCTGTTGCTCATCGTCGGCCTGCTGGTCGGCGTCGGGGTTGCCGTCGGCTTTGCCTT
GAGCGCATTGCAGCAGAACATCAACCTGTTCTATACACCGACCCAGATCGCCAACGGCGAAGCCCCGCTGGACACGCGCA
TCCGCGCCGGCGGCATGGTCGAGAAAGGCTCGGTGCAGCGCTCGGCCGACTCGCTGGACGTGCGTTTCGTGGTAACCGAC
TTCAACAAGTCGGTACCCATCACCTACCGCGGCATCCTTCCCGATCTGTTCCGCGAAGGGCAGGGTATCGTCGCCCTTGG
CAAGCTCAACACCGAAGGTGTGGTGGTAGCCGATGAGGTGCTGGCCAAGCACGACGAGAAATACATGCCGCCCGAAGTCA
CCAAGGCCCTGAAGGAAAGCGGCCAGGCCGCTACCGGCGGAGAGACGAAGCCATGA

Protein sequence :
MNPQRKKRLLLIVGLLVGVGVAVGFALSALQQNINLFYTPTQIANGEAPLDTRIRAGGMVEKGSVQRSADSLDVRFVVTD
FNKSVPITYRGILPDLFREGQGIVALGKLNTEGVVVADEVLAKHDEKYMPPEVTKALKESGQAATGGETKP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cycJ / ccmE AAN62107.1 putative cytochrome C-type biogenesis protein CycJ Not tested PAGI-2(C) Protein 4e-29 56
ccmE YP_217242.1 cytochrome c-type biogenesis protein CcmE Not tested SPI-12 Protein 1e-23 54