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Name : PPUBIRD1_1529 (PPUBIRD1_1529) Accession : YP_005929406.1 Strain : Pseudomonas putida BIRD-1 Genome accession: NC_017530 Putative virulence/resistance : Unknown Product : Cytochrome c-type biogenesis protein ccmF Function : - COG functional category : - COG ID : - EC number : - Position : 1708311 - 1710299 bp Length : 1989 bp Strand : + Note : - DNA sequence : ATGAACGCAGCACTGGTAGTCCCCGAACTGGGCCAGTTGGCGATGATTCTGGCCATCTGCTTTGCCGTCGTGCAGGCCAG TGTGCCGCTGCTTGGCGCGTGGCGTGGCGACAGCCTGTGGATGAGCCTGGCGCGGCCGGCAGCCTGGGGGCAGTTCGCCT TCCTGGCGTTTGCCTTTGCCTGCCTGACCCATGCCTTCATGACAGACAATTTCTCGGTCGCCTATGTCGCCAGCAACTCC AACAGCGCCTTGCCCTGGTACTACAAGTTCAGTGCGGTGTGGGGCGCCCATGAGGGTTCGTTGCTGCTTTGGGCGCTGAT CCTCGGCGGCTGGACCTTTGCCGTGTCGGTGTTCTCCCGGCAGTTGCCGCAAGTGATGCTGGCCCGCGTGCTGGCGGTAA TGGGCATGATCAGCGTGGGCTTCCTGAGCTTCCTGATCATTACTTCCAACCCATTCCAGCGCCTGCTGCCGCAGGTGCCG ACCGATGGCCGTGACCTCAACCCGCTGTTGCAGGACTTTGGCCTGATCGTGCATCCGCCGATGCTGTACATGGGCTACGT GGGCTTCTCGGTGGCCTTCGCTTTCGCCATCGCCGCCTTGCTCGGCGGCCGGCTGGACGCTGCCTGGGCGCGCTGGTCGC GGCCGTGGACCATCGTCGCCTGGGCTTTCCTGGGTGTTGGTATCACCTTGGGTTCGTGGTGGGCCTACTACGAACTGGGC TGGGGTGGCTGGTGGTTCTGGGACCCGGTGGAAAACGCCTCGTTCATGCCTTGGCTGGTGGGCACCGCACTGATCCACTC GCTGGCGGTGACCGAGAAGCGCGGGGTGTTCAAGAGCTGGACCGTGCTGCTGGCAATTGCCGCATTCTCGCTCAGCCTGC TGGGTACCTTCCTGGTGCGTTCCGGGGTGCTGACCTCGGTGCACGCGTTTGCCGCCGACCCTTCGCGTGGCATTTTCATC CTGTTTTTCCTGCTGTTCGTGGTTGGCGGGTCGCTCACCCTGTTCGCCCTGCGCGCACCGGTGGTCAAGAGCCAGGTCGG TTTCGCCCTGTGGTCGCGTGAAACGCTGCTGCTGGCCAACAACCTGGTGCTGGTGGTCGCGGCTTCGATGATTCTGCTCG GTACCCTGTACCCATTGGTGCTCGATGCCCTGACCGGGGCCAAGCTGTCGGTCGGCCCGCCCTACTTCGACGCCTTGTTC CTGCCGCTGATGGCGCTGCTGATGGTGGTGCTGAGCGTGGGCGTGGTGGTGCGCTGGAAGGACACCCCGGGCAAATGGCT GGCCAGCATGATGACCCCGGTATTGATCGGCAGTGCCATCCTTGCCCCGGTTGCCGGCTTTATCGTCGACGACTTCGACT GGCCGACGCTGACGGCCTTCGCCCTGGCCGCCTGGGTAGTGCTTGGCGGGCTGCGTGACATTCTCGACAAGACCCGCCAC AAGGGCCTGGTCAAAGGCCTGCCGGGCCTGGGCCGCAGCTACTGGGGCATGCAACTGGCGCACCTGGGCCTGGCGGTGTG TGCGCTGGGCGTGGTGCTGTCCAGCAACAACAGCGCCGAGCGCGACCTGCGCATGGCGCCGGGCGAAAGCGTGGAGCTGG GTGGCTACCACTTCCTGTTCCAGGGCGCCAAGCACTTCGAGGGGCCGAACTTCATCTCTGACAAGGGCACCATCGTGGTC AGCCGCGATGGCCGTGAAGTGACCACACTTTACCCGGAGAAGCGCCTGTACACCGTGCAGCAGTCGATGATGACCGAAGC AGGTATCGACGCCGGCTTTACCCGCGACCTGTACGTTGCGCTTGGCGAGCCACTGGAGAATGGCGCCTGGGCTGTGCGCG TACATATAAAGCCTTACGTCCGCTGGATCTGGCTGGGCGGTCTGCTGACCGGCCTGGGCGGGTTGCTGGCGGCCCTCGAC CGGCGCTACCGCGTCAAGGTCAAGACCCGGGTGCGTGATGTCCTGGGCGTGTCTGGAGCAGCTGCATGA Protein sequence : MNAALVVPELGQLAMILAICFAVVQASVPLLGAWRGDSLWMSLARPAAWGQFAFLAFAFACLTHAFMTDNFSVAYVASNS NSALPWYYKFSAVWGAHEGSLLLWALILGGWTFAVSVFSRQLPQVMLARVLAVMGMISVGFLSFLIITSNPFQRLLPQVP TDGRDLNPLLQDFGLIVHPPMLYMGYVGFSVAFAFAIAALLGGRLDAAWARWSRPWTIVAWAFLGVGITLGSWWAYYELG WGGWWFWDPVENASFMPWLVGTALIHSLAVTEKRGVFKSWTVLLAIAAFSLSLLGTFLVRSGVLTSVHAFAADPSRGIFI LFFLLFVVGGSLTLFALRAPVVKSQVGFALWSRETLLLANNLVLVVAASMILLGTLYPLVLDALTGAKLSVGPPYFDALF LPLMALLMVVLSVGVVVRWKDTPGKWLASMMTPVLIGSAILAPVAGFIVDDFDWPTLTAFALAAWVVLGGLRDILDKTRH KGLVKGLPGLGRSYWGMQLAHLGLAVCALGVVLSSNNSAERDLRMAPGESVELGGYHFLFQGAKHFEGPNFISDKGTIVV SRDGREVTTLYPEKRLYTVQQSMMTEAGIDAGFTRDLYVALGEPLENGAWAVRVHIKPYVRWIWLGGLLTGLGGLLAALD RRYRVKVKTRVRDVLGVSGAAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 9e-110 | 57 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 3e-103 | 57 |
