Gene Information

Name : rnhA (PPUBIRD1_1707)
Accession : YP_005929579.1
Strain : Pseudomonas putida BIRD-1
Genome accession: NC_017530
Putative virulence/resistance : Unknown
Product : protein RnhA
Function : -
COG functional category : -
COG ID : -
EC number : 3.1.26.4
Position : 1939663 - 1940109 bp
Length : 447 bp
Strand : +
Note : Ribonuclease HI

DNA sequence :
ATGAGCGATAGCGTCGAGATGTTTACTGATGGTGCCTGCAAGGGCAACCCTGGCCCGGGTGGCTGGGGCGTGCTGATGAT
CTACAAGGGCGTCGAGAAGGAACTGTGGGGCGGCGAACGTGAGACCACCAACAACCGCATGGAGCTGATGGCCGCGATCC
AGGGCCTCATGTCGCTCAAGCGTGAATGCGAGGTGGTGCTGACCACGGACTCGCAGTACGTGATGAAGGGCATCAACGAA
TGGATGGTCAACTGGAAGAAGCGCGGCTGGAAGACCGCCGCCAAGGAGCCGGTGAAGAACGCTGACTTGTGGCAGCAGCT
CGATGAGCAGGTCAACCGCCACAAGGTAACCTGGAAGTGGGTGCGCGGCCATATTGGCCACCCCGGCAATGAACGCGCCG
ACCAGCTGGCCAACCGTGGGGTCGATGAGGTACGCGCCCAGCGTTGA

Protein sequence :
MSDSVEMFTDGACKGNPGPGGWGVLMIYKGVEKELWGGERETTNNRMELMAAIQGLMSLKRECEVVLTTDSQYVMKGINE
WMVNWKKRGWKTAAKEPVKNADLWQQLDEQVNRHKVTWKWVRGHIGHPGNERADQLANRGVDEVRAQR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 6e-39 60