Gene Information

Name : fecI (PPUBIRD1_0192)
Accession : YP_005928105.1
Strain : Pseudomonas putida BIRD-1
Genome accession: NC_017530
Putative virulence/resistance : Virulence
Product : FecI
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 214508 - 215011 bp
Length : 504 bp
Strand : -
Note : ECF subfamily RNA polymerase sigma factor

DNA sequence :

ATGCCCAGCAACGATTCCGTGCAAACGCTCTACAGTGACCACCACGGCTGGTTGCATACCTGGCTGCGTAGCAAGCTCGG
CAACGCAGCCGATGCGGCTGACCTCGCCCAGGATACCTTCGTCCGCCTGCTACAGCGTCGTGAACAATTGCAGCTGAATG
CTCCCAGGGCCTTCCTGCGCACGGTAGCGCGTGGGTTGGTGATCGATCATTGGCGCCGCGAGGAACTGCACAGGGCTTAC
CTGGAGGCCTTGGCCCATGTGCCGGAAGCACTGGTCCCCTCAGTCGAGACCCGCGAGCTGCTGCTGGAATTGCTTGAGCG
TATTGCGCGCATGCTCGACGGTCTCAAACCCAAGGTACGCCGCGCATTCCTGCTGGCTCAATGCGAGGGGCTGAAGCATC
AGGCCATCGCCGAACAGATGGGGATCTCCGTGCGCACCGTTGAGCGCTACATCGCCGATGCGCTCTATCACTGCTACGTG
CTGCGCTATGAAGACGACTGCTGA

Protein sequence :

MPSNDSVQTLYSDHHGWLHTWLRSKLGNAADAADLAQDTFVRLLQRREQLQLNAPRAFLRTVARGLVIDHWRREELHRAY
LEALAHVPEALVPSVETRELLLELLERIARMLDGLKPKVRRAFLLAQCEGLKHQAIAEQMGISVRTVERYIADALYHCYV
LRYEDDC

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	AAL08458.1	FecI	Virulence	SRL	Protein	3e-29	46

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
fecI	YP_005928105.1	FecI	VFG1049	Protein	1e-29	46