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Name : PPUBIRD1_2017 (PPUBIRD1_2017) Accession : YP_005929870.1 Strain : Pseudomonas putida BIRD-1 Genome accession: NC_017530 Putative virulence/resistance : Unknown Product : Glycolate oxidase subunit glcD Function : - COG functional category : - COG ID : - EC number : - Position : 2270918 - 2272408 bp Length : 1491 bp Strand : - Note : - DNA sequence : TTGTACGACGAACGCGTCGATGGCGTGCTGCCTGACGTGGACCGGGCCGCCCTGTTGCAGGCGCTGCGCGATGCCCTGCC GGACCTTGAAATCCTGCACCGCGATGAAGACCTCAAACCGTACGAATGCGACGGCCTGTCGGCCTACCGCACAGTGCCAT TGCTGGTGGTGCTGCCCGAACACCTGGAGCAGGTGCAAACGCTGCTGAAGCTTTGCCACCAGCGCGGCGTACCGGTGGTT GCGCGTGGCGCCGGTACCGGCCTGTCCGGTGGTGCCCTGCCGCTGGCCAAGGGCATCCTGCTGGTGATGGCGCGCTTCAA CCGCATCCTCGAGGTCAACCCGCAGGGGCGCTACGCCCGCGTGCAACCGGGCGTACGCAACCTGGCCATTTCCCAGGCCG CCGCACCCCATGGCATGTACTACGCACCAGACCCTTCCTCGCAAATTGCCTGCTCAATCGGGGGTAACGTCGCCGAAAAC GCCGGTGGCGTGCACTGCCTCAAGTACGGCCTGACCGTACACAATGTGCTCAAGGTGGACATCCTCACGGTCGAGGGCGA ACGCCTGAGCCTGGGCAGCGATGCCTTGGACAGCCCCGGCTTCGACCTGCTGGCATTGTTCACCGGCTCCGAAGGCATGC TCGGTATCGTCACCGAAGTCACCGTCAAGCTGCTGCCCAAGCCCCAGGTGGCGCGGGTGATACTGGCCAGTTTCGAAAGC GTCGAGGACGCTGGCCGGGCAGTCGCCGACATTATCGCTGCCGGCATCATCCCTGGTGGCCTGGAGATGATGGACAACCT GGCGATCCGCGCCGCTGAAGACTTCATCCATGCCGGCTACCCGGTGGACGCGGCGGCGATCCTGCTGTGCGAACTGGATG GCGTGGAAGCCGATGTTCACGACGACTGCGAGCGCGTCGCCGCCGTGCTGACGCAAGCCGGGGCCCGCGAGGTGCGCCTG GCCTGCGACGAAGCCGAGCGCGTTCGCTTCTGGGCCGGGCGCAAGAACGCCTTCCCGGCCGTAGGGCGCATCTCCCCCGA CTACTACTGCATGGACGGCACCATCCCGCGCCGCGAGTTACCACGGGTACTCAAGGGCATCAGCGACCTGTCCGCGGAGT ACGGCCTGCGGGTGGCCAACGTGTTCCATGCTGGCGACGGCAACATGCACCCTTTGATCCTGTTCGATGCCAACCTGCCC GGCGAGCTGGAGCGTGCCGAAGCGATCGGCGGCAAGATTCTGGAGCTGTGTGTGAAAGTGGGCGGCAGCATCACCGGTGA ACACGGCGTGGGGCGCGAGAAGATCAACCAGATGTGCGCGCAGTTCAACAGCGACGAAATTACCCTGTTCCACGCGGTGA AGGCCGCCTTCGACCCCCAGGGCCTGCTCAACCCCGGCAAGAACATTCCCACCCTGCACCGCTGCGCCGAATTCGGCGCC CTGCACGTGCACCAGGGGCAACTGCCCTTCCCCGAGCTGGAGCGCTTCTGA Protein sequence : MYDERVDGVLPDVDRAALLQALRDALPDLEILHRDEDLKPYECDGLSAYRTVPLLVVLPEHLEQVQTLLKLCHQRGVPVV ARGAGTGLSGGALPLAKGILLVMARFNRILEVNPQGRYARVQPGVRNLAISQAAAPHGMYYAPDPSSQIACSIGGNVAEN AGGVHCLKYGLTVHNVLKVDILTVEGERLSLGSDALDSPGFDLLALFTGSEGMLGIVTEVTVKLLPKPQVARVILASFES VEDAGRAVADIIAAGIIPGGLEMMDNLAIRAAEDFIHAGYPVDAAAILLCELDGVEADVHDDCERVAAVLTQAGAREVRL ACDEAERVRFWAGRKNAFPAVGRISPDYYCMDGTIPRRELPRVLKGISDLSAEYGLRVANVFHAGDGNMHPLILFDANLP GELERAEAIGGKILELCVKVGGSITGEHGVGREKINQMCAQFNSDEITLFHAVKAAFDPQGLLNPGKNIPTLHRCAEFGA LHVHQGQLPFPELERF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 9e-179 | 82 |
