|
Name : PPUBIRD1_3067 (PPUBIRD1_3067) Accession : YP_005930880.1 Strain : Pseudomonas putida BIRD-1 Genome accession: NC_017530 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 3441776 - 3443224 bp Length : 1449 bp Strand : + Note : - DNA sequence : ATGCCCAAGCCAAGCAGCACCGCCATCACCACAGACGCAACGGCCGACACATTGAGCAATGCCACCTTGCTCGACCAGAT CATGGCAGAAACCAAGCTGGTGCCTGCTCAGGAGGGCTACCAGATTGCCAGGCAGGGCGTATCTGCCTTCATCACCGAAA TCCTCAAGAGCAATGACCCGGATCAACTGATCAACAAGCACCGGGCCGACCAGATGATTGCCGAGATCGACCGAATGCTC GGCAAACAGATGGATGCCATTCTGCATCAGCCTGAGTTCCAGCAGCTTGAATCATCATGGCGCAGCCTGAAACTTCTGGT CGACCGCACGGACTTCAGGGAGAACATCAAGCTTGAAGTCTTGCATGTCACTAAAGAGGACCTGCTCGACGACTTCGAAA ATGCTGCTGACATTACCTGCAGCGGTATCTACAAGCATGTTTACACCGCGGGTTATGGCCAATTCGGGGGAGAGCCGGTT GCGGCCATGGTAGGCAACTACAACTTCGGCCCCTCTTCCCCTGACATCAAGTTGCTAAGTTACATGGCCTCCGTTGGCGC CATGTCCCATGCCCCTTTTCTTGCTGCACCGGCCCCCGAATTCTTCAATTTGAACAGCTTCGAGGAGCTGCCTAACCTCA AGGAAATAAAAGACCTCTTCGCCGGCCCTCGGCATGCCAAGTGGCGCGCTTTTCGTGAAAGCGAAGACGCCCGCCACGTC GCCCTGACCGGGCCGCGCTTCATGCTTCGCTCCGCTTACCACCCGCAGGAACAACCGATCGAGAGCTTCAACTACAACGA AGACATCGCCGGGCAGCACGACAACTACCTATGGGGCAATTCTGCTTTTCTGTTAGCCAGTTGCATCAACGACAGCTTCG CCCGCTACCGCTGGTGCCCGAACATCATCGGCCCCCAATCGGGCGGTGCTGTCGAAGACTTGCCGGTCCATCTGTACGAA TCCCTGGGCCAGTTGCAGGCCAAGATTCCTACCGAGGTGCTGATATCCGACCGCAAGGAATTCGAACTGGCTGAAGAGGG CTTCATCGCCCTGACCATGCGCAAAGACAGCGACAACGCCGCGTTTTTCTCCGCCAACTCGGTACAAAAGCCCAAGCACT TCCCGAAAACCCCTGAGGGGCTGCAGGCCCAGACCAACTACAAGCTGGGTACCTGTCCGGCCAGAGCACCGGCTGGGTGT GGGCCGACACCTGCCAGGACTCCGCCGAGGAAGTGTGGATCGGCTACAGCCCGCACCTGTGGACCAACGCCATCACCGCC CGTATCACCGGTTCGGCAGCCCTGCGCAAACGGCACATGCGCCAGCTGGACATGGCCGAGCTGGTTAGCGGCAACCCGGC GCCGTCCACCCAGCCCCATGTGCTGCCAGTCAGTGCCCTGCAAACCTGGGTCGAAGACTTCAAGCCAACCGAGCGGCGCA TGCCGCTAA Protein sequence : MPKPSSTAITTDATADTLSNATLLDQIMAETKLVPAQEGYQIARQGVSAFITEILKSNDPDQLINKHRADQMIAEIDRML GKQMDAILHQPEFQQLESSWRSLKLLVDRTDFRENIKLEVLHVTKEDLLDDFENAADITCSGIYKHVYTAGYGQFGGEPV AAMVGNYNFGPSSPDIKLLSYMASVGAMSHAPFLAAPAPEFFNLNSFEELPNLKEIKDLFAGPRHAKWRAFRESEDARHV ALTGPRFMLRSAYHPQEQPIESFNYNEDIAGQHDNYLWGNSAFLLASCINDSFARYRWCPNIIGPQSGGAVEDLPVHLYE SLGQLQAKIPTEVLISDRKEFELAEEGFIALTMRKDSDNAAFFSANSVQKPKHFPKTPEGLQAQTNYKLGTCPARAPAGC GPTPARTPPRKCGSATARTCGPTPSPPVSPVRQPCANGTCASWTWPSWLAATRRRPPSPMCCQSVPCKPGSKTSSQPSGA CR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec18 | YP_851426.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 4e-117 | 64 |
| aec18 | AAQ96712.1 | Aec18 | Not tested | AGI-1 | Protein | 3e-117 | 64 |
| HH0247 | NP_859778.1 | hypothetical protein | Not tested | HHGI1 | Protein | 2e-103 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PPUBIRD1_3067 | YP_005930880.1 | hypothetical protein | VFG2093 | Protein | 5e-127 | 64 |
| PPUBIRD1_3067 | YP_005930880.1 | hypothetical protein | VFG2475 | Protein | 1e-110 | 58 |
