Gene Information

Name : PPUBIRD1_0038 (PPUBIRD1_0038)
Accession : YP_005927953.1
Strain : Pseudomonas putida BIRD-1
Genome accession: NC_017530
Putative virulence/resistance : Unknown
Product : Transketolase family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 38049 - 38897 bp
Length : 849 bp
Strand : -
Note : -

DNA sequence : 
ATGACTGTCAACGCACCCGACACTTCGCTCTCGGCGCTCGCCGAACGCGCGTACAACATTCGCCGCCATGCCCTGCGCAT
GGGGCAGGTCCAGGGCCAGGGTTATGTCGGCCAGGCCCTCGGCGCCGCTGACTTGCTGGCCGTGTCGTACTTCCATGCGC
TGCGCTATCAGCCCCACAACCCCGAATGGGAGCAACGCGACCGCTTTTACCTGTCCATCGGTCACTACGCCATCGCCCTG
TATGCAGCGCTGATCGAAGCCGGCGTGATCCCCCTGGAGGAACTGGAAACCTATGGTTCGGACGACAGCCGCCTGCCGAT
GTCGGGCATGGCCGCCTACACGCCGGGCATGGAAATAACCGGGGGGTCGCTCGGCCACGGCTTGGGCATAGCGGTCGGTG
CCTGCCTGGGCCTGAAACGCAAGAAATCGGATTCGTTTGTCTACAACCTGCTCTCGGACGGCGAATTGAACGAAGGATCA
ACCTGGGAAGCCGCGATGTCGGCCTCACATTGGAAACTGAACAACCTCATCGCAATCATCGACGTCAACAACCAGCAAGC
CGACGGCTACTCCAGCGAAGTGCTGGCATTCGAGCCCATCGTTGATCGTTGGCAGGCGTTTGGCTGGTTTACCCAGCGCG
TGGACGGCAACGACATCGGGGCCCTGGTCGCCGCGTTCGACGCCGCACGCAACCATCAAGGTGCACAGCCGCGGGTCATC
ATCTGCGATACCAAGATGGGCAAGGGTGTGGACTTTCTCGAGTCACGTGAAAAAACCCACTTCATCCGCGTCGATGAAAA
CGAGTGGGATCTGGCATTGCAAAACCTTCAGGTCGGGAGAATCGTATGA

Protein sequence : 
MTVNAPDTSLSALAERAYNIRRHALRMGQVQGQGYVGQALGAADLLAVSYFHALRYQPHNPEWEQRDRFYLSIGHYAIAL
YAALIEAGVIPLEELETYGSDDSRLPMSGMAAYTPGMEITGGSLGHGLGIAVGACLGLKRKKSDSFVYNLLSDGELNEGS
TWEAAMSASHWKLNNLIAIIDVNNQQADGYSSEVLAFEPIVDRWQAFGWFTQRVDGNDIGALVAAFDAARNHQGAQPRVI
ICDTKMGKGVDFLESREKTHFIRVDENEWDLALQNLQVGRIV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96229.1 transketolase Not tested T-PAI Protein 1e-103 88
unnamed AAT96177.1 transketolase Not tested T-PAI Protein 1e-103 88
unnamed AAT96117.1 transketolase Not tested T-PAI Protein 4e-104 88
unnamed AAT96056.1 transketolase Not tested T-PAI Protein 2e-104 88
unnamed AAT96100.1 transketolase Not tested T-PAI Protein 1e-103 87