Gene Information

Name : PPUBIRD1_0877 (PPUBIRD1_0877)
Accession : YP_005928766.1
Strain : Pseudomonas putida BIRD-1
Genome accession: NC_017530
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1001747 - 1002640 bp
Length : 894 bp
Strand : -
Note : -

DNA sequence :
GTGAAAGACGTCATCGCCCGCAAGTACCGCCTGGTGGTGAAGACCATCGGCTATATCGGCTGGTCGCTGTTCTGGCTGCT
GATCTGGGATGTGCTGGTCACCATCGATTTCATGCTGTTCTTGAACAGCAAGTTCACCCTGCCACTGATCCCGCTGACCC
TGCTGGGCTCAGCCTTGGTAGTGCTGGTGAGTTTTCGCAACAGCAGTGCCTACAACCGCTGGTGGGAGGCTCGCACCCTA
TGGGGGGCGCTGGTGAACAGTTCGCGCAGCTTCGCCCGGCAGACGCTGACGCTGATCGATGACCCGGATGACAGCCTGAA
CCCGGTCAAGGCCACCCTGCTGCGCCGGCATATCGCCTATGTGAACTGCCTGGCGGCGCACTTGAAAGGCGAAAGCTGCC
CGGAGGAGCTGATGGCCTTCATCCCCCCGGCGGAGTTCGAACGGCGCAACCGCTCGAACAATTTCGCCAATGACATTCTC
GGCGGCTCGGCAGCCTTGCTGGCGCGGGAATACCAGGCCGGGCGACTGGACAGCATTCGTCTGGCGCGACTGGAGTCGAC
GCTGGTAGACCTTTCTAACGCCCAGGGCGGCATGGAACGGATTGCCAATACGCCATTGCCCTACCCCTATGTGTATTTCC
CACGGCTGTTCATCACCCTGTTCTGCTTGATCGTGCCGGTGGGGCTTGTGGAGTCGCTGGGCTGGTTCACGCCGCTGGCG
TCGACGGTGGTAGGGTTCATGTTGCTGGCCATCGAGCGGATCGGCACGGACTTGCAGAGCCCGTTCAGGTTCAGCGAGCA
TCAGATCCAGATGGATACCATATGCGAGACGATCGAGCGTAACCTGGAGTCGATGCAGCGGGAGGCGCAGTGTGCCGAGG
CTGTAGACGCCTGA

Protein sequence :
MKDVIARKYRLVVKTIGYIGWSLFWLLIWDVLVTIDFMLFLNSKFTLPLIPLTLLGSALVVLVSFRNSSAYNRWWEARTL
WGALVNSSRSFARQTLTLIDDPDDSLNPVKATLLRRHIAYVNCLAAHLKGESCPEELMAFIPPAEFERRNRSNNFANDIL
GGSAALLAREYQAGRLDSIRLARLESTLVDLSNAQGGMERIANTPLPYPYVYFPRLFITLFCLIVPVGLVESLGWFTPLA
STVVGFMLLAIERIGTDLQSPFRFSEHQIQMDTICETIERNLESMQREAQCAEAVDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
PSPTO_1371 NP_791198.1 effector locus protein Not tested Hrp PAI Protein 4e-87 64
unnamed AAF71505.1 unknown Not tested Hrp PAI Protein 1e-87 64
unnamed AAT96051.1 Pspto1371-like protein Not tested T-PAI Protein 2e-79 63
unnamed AAT96095.1 Pspto1371-like protein Not tested T-PAI Protein 1e-79 63
unnamed AAT96112.1 Pspto1371-like protein Not tested T-PAI Protein 6e-80 63
unnamed AAT96224.1 Pspto1371-like protein Not tested T-PAI Protein 2e-80 62
unnamed AAT96170.1 Pspto1371-like protein Not tested T-PAI Protein 2e-80 62