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Name : secD (PPUBIRD1_0886) Accession : YP_005928775.1 Strain : Pseudomonas putida BIRD-1 Genome accession: NC_017530 Putative virulence/resistance : Unknown Product : protein SecD Function : - COG functional category : - COG ID : - EC number : - Position : 1010768 - 1012630 bp Length : 1863 bp Strand : + Note : Protein-export membrane protein secD DNA sequence : ATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGTCGGTTTCATTTATTCCGCTCCCAA CCTCTACCCGGATGACCCGGCGGTACAGATCAGCGGTGCCAGCTCGGCGCTGCAGGTGAATCAGGCCGACCTCGATCGCG TCAGCAAGGCGCTGGTCGATGCCAAGATCGCCGTCAAGGGCGCAAGCCTGGGTGAAAAGGGCAGCGGGCTGATCCGCCTG ACCAATCAGGAAGACCAACTGCCAGCCAAGGATGTCGTGCGCAAGGCACTGGGCGATGATTACGTCGTGGCCCTGAACCT GGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCTGGTGGTGTGC ACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGGCTGCCCGCATGAAAGTCTACGAAGGCGAGGTCAAGACCTTGCTG CGCAAAGAGCGCGTCCGCTACCGCAGCCTGCCTCAGCAGGATGGCGGCATCATGCTGGGCTTCGCTGACGATGCCACCCG CGAACAGGCACGTGCCCTGATCCGCAAGAATTTCAATGATTTCGAACTGACCACCACCGAGCGCAACGAGCTTGCGGTGC TGCGTCTGGCGCTGACTCAGGCGAAAGTCGCCGAGATCCGCGAATACTCGATCAAGCAGAACCTCACCACCGTGCGCAAC CGCGTGAACGAACTGGGTGTGGCCGAGCCCCTGGTACAGCGCCAGGGCGCCAACCGTATCGTGGTCGAGCTGCCTGGCGT GCAGGACACTGCCGAAGCCAAGCGTATCCTCGGTAAAACGGCCAACCTGGAGTTCCGCTTCGGTGCTGAACCAGGTGCAT CCAAAGCCACTACCGAGGTGTTCGAGTTCCGTGAGGGCGGCCGCTCCGCTGCCGTCGAGCGTGGCCTGATCATCACGGGT GACCAGGTCACCGACGCCCAGGCCAGTTTTGACGAGCATGGTAGCCCGCAGGTGAACATTCGTCTGGATGGTCACGGTGG CGAGCTGATGAGCCGCGCAACGCGCAGCAACGTTGGCCGTAGCATGGCGGTGATCTTCATCGAGCAGAAGCCAGTCACCC GTTACGTCAAGCAGACTGTCGGTGGCGTCGAGAAGGACGTTGCCGTACAAAGTTTTGTGGAAGAGAAGAAAATCATCAGC CTGGCGACCATCCAGTCGCCGCTGGGCAGCCAATTCCGCATCACCGGCCTGAACGGCCAGGGCGAGTCGTCGGAACTGGC TCTGCTGCTGCGTGCCGGTGGTCTGGCCGCGCCAATGTACTTCGCTGAAGAACGTACCATTGGCCCAAGCCTGGGTGCCG ACAACATCACCAAGGGTATCGACGCCTCGCTGTGGGGCATGTTGTTTGTCTCTCTGTTCATCATTGCCATCTACCGCGCC TTCGGCGTGCTGGCCACCATCGCCCTGGCGGGCAACATGGTGCTGCTGCTGGCGTTGATGTCGCTGCTGGGGGCGACCCT GACCCTGCCGGGTATTGCCGGCATCGTGTTGACCATGGGTATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGTATTC GCGAAGAGATCGCTGCTGGCATGTCGGTGCAGCGCGCTATCCACGAAGGCTTCAATCGCGCCTACTCGGCAATCGTCGAC GCCAACCTGACCACCCTGTTGGTCGGCGGCATCCTGTTTGCCATGGGTACCGGCCCGGTCAAAGGCTTTGCGGTCACCAT GTCCCTCGGGATTTTCACCTCGATGTTCACCGCCGTCATGGTGACCCGTGCATTGGTCAACCTGACCTGCGGCGGGCGTG ACATCAAGAAGCTGTGGGTTTGA Protein sequence : MLNKYPLWKYALIVLVLVVGFIYSAPNLYPDDPAVQISGASSALQVNQADLDRVSKALVDAKIAVKGASLGEKGSGLIRL TNQEDQLPAKDVVRKALGDDYVVALNLAQTTPQWLRNLGASPMKLGLDLSGGVHFLLEVDMDKAMAARMKVYEGEVKTLL RKERVRYRSLPQQDGGIMLGFADDATREQARALIRKNFNDFELTTTERNELAVLRLALTQAKVAEIREYSIKQNLTTVRN RVNELGVAEPLVQRQGANRIVVELPGVQDTAEAKRILGKTANLEFRFGAEPGASKATTEVFEFREGGRSAAVERGLIITG DQVTDAQASFDEHGSPQVNIRLDGHGGELMSRATRSNVGRSMAVIFIEQKPVTRYVKQTVGGVEKDVAVQSFVEEKKIIS LATIQSPLGSQFRITGLNGQGESSELALLLRAGGLAAPMYFAEERTIGPSLGADNITKGIDASLWGMLFVSLFIIAIYRA FGVLATIALAGNMVLLLALMSLLGATLTLPGIAGIVLTMGMAVDANVLIFSRIREEIAAGMSVQRAIHEGFNRAYSAIVD ANLTTLLVGGILFAMGTGPVKGFAVTMSLGIFTSMFTAVMVTRALVNLTCGGRDIKKLWV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 86 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 86 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 86 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 86 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 86 |
