Gene Information

Name : secF (PPUBIRD1_0887)
Accession : YP_005928776.1
Strain : Pseudomonas putida BIRD-1
Genome accession: NC_017530
Putative virulence/resistance : Unknown
Product : SecF
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1012641 - 1013549 bp
Length : 909 bp
Strand : +
Note : preprotein translocase subunit SecF

DNA sequence :
ATGAAAACCATCAATTTCATGGGCGTGCGCAATGTCGCGTTCGCCGTCACCGTGCTCCTCACCGTGTTGGCGCTGTTCAG
CTGGTGGCAAAAGGGCCTGAACTTCGGGCTGGACTTCACCGGGGGTACGCTGATCGAGCTGACCTACGAGCGTCCTGCCG
ACCTCAAGGCGGTGCGTGCCGAGCTGGTCAACTCCGGCTTCGACGAGGCGGTGGTGCAGAGCTTCGGCGCCACTACCGAC
CTGCTGGTGCGCATGCCGGGCGATGACCCGCAGTTGGGCAACAAGGTAGCTGCCGCGCTGCAGAAGGCAGGCGGCGACAA
CCCGGCCACGGTCAAGCGTGTCGAGTTCGTCGGTCCGCAGGTCGGTGAAGAGCTGCGCGACCAGGGCGGCATGGGCATGC
TCCTGGCTCTGGGCGGTATCCTCATCTACCTGGCCTTCCGCTTCCAGTGGAAGTTCGCCGTTGGCGCGATCATCTCGCTG
ATCCACGACGTGGTGGTAACGCTGGGTATCCTGTCGTTCTTCCAGATCACCTTCGACCTGACAGTGCTGGCGGCGGTCCT
GGCGATCATCGGTTACTCGCTGAACGACACCATTGTTGTGTTCGACCGGGTACGCGAGAACTTCCGTGTCATGCGCAAGG
CCTCGCTGATCGAGAACATCAACATTTCCACCACCCAGACCCTGCTGCGTACCGTCGCCACTTCGGTTTCGACCTTGCTG
GCCATTGCTGCGCTGCTGTTCTTCGGGGGTGACAACCTGTTCGGTTTCTCACTGGCACTGTTCATTGGTGTCATGGCCGG
TACTTATTCGTCGATCTATATCGCCAACGTGGTACTGATCTGGCTGAACCTGAATAGCGAAGACCTGATCCCGCCGACCA
AGGCCGAGGGTGTGGATGATCGTCCGTAA

Protein sequence :
MKTINFMGVRNVAFAVTVLLTVLALFSWWQKGLNFGLDFTGGTLIELTYERPADLKAVRAELVNSGFDEAVVQSFGATTD
LLVRMPGDDPQLGNKVAAALQKAGGDNPATVKRVEFVGPQVGEELRDQGGMGMLLALGGILIYLAFRFQWKFAVGAIISL
IHDVVVTLGILSFFQITFDLTVLAAVLAIIGYSLNDTIVVFDRVRENFRVMRKASLIENINISTTQTLLRTVATSVSTLL
AIAALLFFGGDNLFGFSLALFIGVMAGTYSSIYIANVVLIWLNLNSEDLIPPTKAEGVDDRP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
secF AAT96102.1 SecF Not tested T-PAI Protein 3e-92 86
secF AAT96066.1 SecF Not tested T-PAI Protein 4e-92 86