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Name : PPUBIRD1_0918 (PPUBIRD1_0918) Accession : YP_005928807.1 Strain : Pseudomonas putida BIRD-1 Genome accession: NC_017530 Putative virulence/resistance : Virulence Product : FecA-like outer membrane receptor Function : - COG functional category : - COG ID : - EC number : - Position : 1044656 - 1047085 bp Length : 2430 bp Strand : + Note : - DNA sequence : GTGAACAACAACAAACCCTTCCCACGCTTTCGCGCCCTGGCGCTGGCCCTGGCGGTCAGCACCGTGGCCGTTGACAGCCA GGCCGCAGAGGCCGGCAATACCCTCCAGATCCAGGCCCAGCCGTTGGGTTCGGCGCTGAACCAGCTCGGCCAGCAGACCA GCCTGCAGCTGTTTTTCAGCCCCGAGCTGGTCGCCGGCAAACAGGCCCCGGCGGTATCGGGCAAGCTGGCGCCGGTGCAG GCGCTGCAACAGCTGTTGCAAGGCAGCGGGCTCACCTTCGAGGTGACCGGGGACACCGTTGTGGTGAAGCCACTGCCGAC TACCCTTGACCTGGGCAGCGGCAGCCTGGAGCTGGCACCCACCGACATCAAAGTGGTCGGTGACTGGCTGGGTGATGCCC AGCAGAGCGTGGTACAGAACCACCCCGGGGCACGCACCGTGGTACGCCGCGAGGCAATGGTGGAGAAGGGCGCAATGAAC GTGCGCGACGTGCTGCGCGGCATCCCAGGCGTGCAAGTGCAGGACTCCAACGGAACCGGTGGCAGCGACCTGTCGCTGAA CGTGGGCGTGCGCGGCCTTACTTCGCGCCTGTCGCCGCGCTCCACGGTACTGATCGATGGCATCCCGGCCGCCTTCGCGC CGTATGGCCAGCCACAGCTGTCGATGGCACCGATTTCTTCTGGCAACCTCGACAGCATCGACGTCGTGCGCGGTGCCGGC TCGGTGCGCTACGGCCCGCAGAACGTGGGCGGCGTGATCAACTTTGTAACCCGTGCGATTCCGGAAAAGGCCTCGGCAGA GCTGTCCACCACCCTGGAGACCTCCCAGCACGGTGGCTGGAAACACACCGAGTCAGCCTTCGTCGGTGGCACGGCCGACA ATGGCATGGGCGTGGCGCTGTTGTACACCGGGGTGAATGGCAACGGTTACCGTGAAAGCAACAACGGCAACGACATCGAC GACGTTATCCTCAAGACGCATTGGGCGCCAACCGATGTCGATGAGTTCTGGCTCAACTTCCATTATTACGATGGCCGTGC CGACATGCCGGGTGGCTTGACCCAGGCCCAATACGACAGCAACCCGTACCAGTCGCTGCGCGATTACGATTACTTCGCGG GCCGGCGCAAGGATGTGTCGTTCAAATGGCAGCGGCAGCTCGATGATGCCACCCAGTTCGAAGTGCTGACCTACTACACC GACAGCTTCCGCGGCAGCACCATCGCCTCGCGGGACATGAAGACGTTGTCGTCGTACCCGCGCAACTACCACACCTTCGC CATCGAACCCCGTGTGTCGCGCATCTTCTTTGCCGGCCCAACCACCCAGGAAGTCAGTGTCGGTTACCGTTACCTGAAGG AAGCGATGCGCGAACAATCGACTCGCCTGGCGCTGATCGACAACGTACCGACGGTGACCCCGACTTCCGACGGCCACGTG TTCCAGGACCGCAGCGGCGGCACCGAGGCCAGCGCCTACTACATCGACGACAAGATCGACGTGGGCAACTGGACCATCAC CCCTGGCGTGCGCTTCGAGCACATCAATACCGACTGGCGCGACCGCCCGGTACTGGACGCCAACAACCGCCCGGTAGCCG AGAAGAAGCGCAGCATCACCAGCAACGAGCCTTTGCCGGCACTGAGCGTGATGTACCACGTTTCCGATGCCTGGAAGGTG TTCGCCAACTACGAGACTTCGTTCGGTAGCCTGCAGTACTTCCAGCTGGGCCAGGGCGGTTCTGGCAACAGTACGGCCAA TGGCCTGGAGCCGGAAAAAGCCAAGACCTACGAAATCGGTACCCGTTATGACAATGGCGGCTTTGCCGGTGAGCTGACGG CGTTCTACATCGACTTCGATGATGAGCTGCAGTACATCAGCAACGACGTGGGCTGGACCAACCTCGGTGCGACCAAGCAC CAGGGCATCGAGGCTTCGGTGCGTTATGACCTGGCCGGGCTGGACCCGCGCCTGGACGGGCTGTCGGTGAGCGGTGGCTA CACCTATACCCGCGCGACCTATGAAGGGGATATCCCGGGGTTCAAGGGCCGGGACCTGCCGTTCTATTCACGCCAGGTGG CCACTGCCGGGGTGCGTTACGCAGTTAACCGCTGGACCTGGAACCTGGACGCCTATGCCCAATCGAAGCAGCGTGCGCCG GGAACCGGGATCAATGCCGATGGCAGTTTCAATGGCGACTACATCACCGAGCCGAGTGCTGACGGGCAGTATGGCGATAT TCCAGGCTACGTGACCTGGCATGCCCGTGGCGGTTATGAGTTCGGGCCGGACATGTCCAACCTGAAGCTGGCGGCGGGGG TGAAGAACCTGTTCGACAAGCAGTACTTCACCCGCTCCAGTGACAACAATGCCGGCCTTTACGTGGGTGAGCCGCGGACC TTCTACGTGCAGGCCAGTGTTGGGTTTTGA Protein sequence : MNNNKPFPRFRALALALAVSTVAVDSQAAEAGNTLQIQAQPLGSALNQLGQQTSLQLFFSPELVAGKQAPAVSGKLAPVQ ALQQLLQGSGLTFEVTGDTVVVKPLPTTLDLGSGSLELAPTDIKVVGDWLGDAQQSVVQNHPGARTVVRREAMVEKGAMN VRDVLRGIPGVQVQDSNGTGGSDLSLNVGVRGLTSRLSPRSTVLIDGIPAAFAPYGQPQLSMAPISSGNLDSIDVVRGAG SVRYGPQNVGGVINFVTRAIPEKASAELSTTLETSQHGGWKHTESAFVGGTADNGMGVALLYTGVNGNGYRESNNGNDID DVILKTHWAPTDVDEFWLNFHYYDGRADMPGGLTQAQYDSNPYQSLRDYDYFAGRRKDVSFKWQRQLDDATQFEVLTYYT DSFRGSTIASRDMKTLSSYPRNYHTFAIEPRVSRIFFAGPTTQEVSVGYRYLKEAMREQSTRLALIDNVPTVTPTSDGHV FQDRSGGTEASAYYIDDKIDVGNWTITPGVRFEHINTDWRDRPVLDANNRPVAEKKRSITSNEPLPALSVMYHVSDAWKV FANYETSFGSLQYFQLGQGGSGNSTANGLEPEKAKTYEIGTRYDNGGFAGELTAFYIDFDDELQYISNDVGWTNLGATKH QGIEASVRYDLAGLDPRLDGLSVSGGYTYTRATYEGDIPGFKGRDLPFYSRQVATAGVRYAVNRWTWNLDAYAQSKQRAP GTGINADGSFNGDYITEPSADGQYGDIPGYVTWHARGGYEFGPDMSNLKLAAGVKNLFDKQYFTRSSDNNAGLYVGEPRT FYVQASVGF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| fecA | AAL08456.2 | FecA | Not tested | SRL | Protein | 1e-136 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PPUBIRD1_0918 | YP_005928807.1 | FecA-like outer membrane receptor | VFG1047 | Protein | 6e-137 | 44 |
