Gene Information

Name : ycfS (PAJ_1067)
Accession : YP_005933943.1
Strain : Pantoea ananatis AJ13355
Genome accession: NC_017531
Putative virulence/resistance : Unknown
Product : ErfK/YbiS/YcfS/YnhG family protein YcfS
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1279983 - 1280963 bp
Length : 981 bp
Strand : +
Note : similar to Pantoea sp. At-9b, ErfK/YbiS/YcfS/YnhG family protein (NCBI: ZP_05728576.1) COG: unknown function subcellular localization as predicted by Psort 2.0: unknown

DNA sequence :
ATGAAACCTGCTTTGCGTTTAGCTGGTGCATTGCTGCTGACCTGCTTTGGGCTCTCTGCACCCGTTTTTGCCACGGAATA
CCCTTTACCGCCCTCCGACAGCCGCCTGATTGGTGAGAATGTGGTGACCCAGGTACCGGATAACAAACGTCCTCTTGAAG
AGATTGCTGCGCGTTATCAGGTCGGGCTGCTGGGCATGTTGGAAGCGAATCCCGGTACCGATCCCTGGTTACCGAAACCG
GGCACCCAGTTGACCATTCCTCTGCAGATGATTCTTCCGGACACGCCGCGTGAAGGCATTGTGGTGAACCTGGCCGAACT
GCGGTTGTACTATTATCCAAAGGGCGAAGACAAGGTTATCGTGTATCCCATTGGCATTGGTCAGATGGGGATCGTCACGC
CCATCATGGTGACCAGCATCAGCCAGAAAATACCCAATCCTACGTGGACGCCCACGGCGAATATCCGCAAGCGCTATGCC
AAAGAGGGCATCACGCTGCCCGCCGTCGTGCCAGCAGGCCCGGATAACCCTATGGGGCTGCATGCGCTGCGTATGGCGCG
TGGAACAGGCCAGTATCTTATCCACGGCACCAATGCCAATTTTGGTATCGGTATGCGCGTCAGTTCAGGCTGTATTCGTT
TACGTACCGAGGATATCGAAGCGCTGTTCAATAGCGTGCCGGTAGGGACGCGGGTACAGATTATTAACCAACCGGTAAAA
TTCAGCGTTGAACCTGATGGTAAGCGCTACGTTGAGGTGCATCAGCCGCTGTCACGTAATGAGAAGGAGGATCCGCAAAC
GGCTCCGTTAGCGCTCAGTGCGGACTTCAGATCCTTTATGAAGAGCGAGAAGAGTGACAGAGCGTTGATTAAAGCCACGC
TGACGCGTCGCTCAGGCATGCCTGTGCTGGTCAGTGCGGGTGAGCCGATACAGGATGAGGCTGCGGCCTCTGCGTCATCC
CAGCGCGCTGTGGGCGAGTAG

Protein sequence :
MKPALRLAGALLLTCFGLSAPVFATEYPLPPSDSRLIGENVVTQVPDNKRPLEEIAARYQVGLLGMLEANPGTDPWLPKP
GTQLTIPLQMILPDTPREGIVVNLAELRLYYYPKGEDKVIVYPIGIGQMGIVTPIMVTSISQKIPNPTWTPTANIRKRYA
KEGITLPAVVPAGPDNPMGLHALRMARGTGQYLIHGTNANFGIGMRVSSGCIRLRTEDIEALFNSVPVGTRVQIINQPVK
FSVEPDGKRYVEVHQPLSRNEKEDPQTAPLALSADFRSFMKSEKSDRALIKATLTRRSGMPVLVSAGEPIQDEAAASASS
QRAVGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
erfK YP_853091.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 6e-76 57