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Name : ccmF (PAJ_1991) Accession : YP_005934867.1 Strain : Pantoea ananatis AJ13355 Genome accession: NC_017531 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : - COG ID : - EC number : - Position : 2418779 - 2420737 bp Length : 1959 bp Strand : - Note : similar to Pantoea sp. At-9b, cytochrome c-type biogenesis protein CcmF (NCBI: ZP_05730636.1) COG: posttranslational modification, protein turnover, chaperones subcellular localization as predicted by Psort 2.0: inner membrane DNA sequence : ATGATGCCAGAACTGGGCAGTTTCTTACTCTGTCTTGGATTAGCGTTGGCGCTGCTGCTCAGCGTCTATCCGCTGTGGGG CGCCTGGCGCCTGGATGCCCGCCTGATGGGCATGGCGCGTCCGCTTGCCGTTGGCCTGTTTGCCTGCGTCGCGGGGGCTT TTATGCTGCTGGTCTGGGCGTTTATCGTTAACGATTTTACCGTGAGCTATGTCGTCAACAACTCAAACTCACTGCTGCCG GTTTACTACCGCATTGCGGCCACCTGGGGCGCGCATGAAGGCTCGTTGCTGCTGTGGGTGCTGCTGCTGAGTGGCTGGAC GCTGGCCGTGGCAATCTTCAGCCGCGGTATGCCGCAGGACGCGCTGGCCCGGGTGTTGTCAGTGATGGGGATGATCAATC TGGGCTTTTTGCTGTTTATCATCCTCACCTCTAATCCCTTCAGCCGGACGCTGCCCGATTTTCCCGTAGACGGTCGCGAT CTTAACCCAATGTTGCAGGATATCGGCCTGATCTTTCATCCTCCACTGCTGTATATGGGCTATGTCGGCTTCTCCGTGGC CTTTGCTTTTGCCATCGCCTCATTAATGGCGGGACGGCTGGATACCGCCTGGGCGCGCTGGTCGCGTCCCTGGTCTACCG CCGCCTGGTTATTCCTGACCATTGGCATCGTACTCGGTTCCGCCTGGGCGTATTACGAACTGGGCTGGGGCGGCTGGTGG TTCTGGGACCCGGTGGAAAACGCCTCCTTTATGCCGTGGCTGGCGGGCACCGCCTTAATGCACTCGCTGGCGGTCACGGA AAAACGCGGCACCTTCAAGGCCTGGACGGTGCTGCTGGCTATTACCGCGTTCTCACTGAGCCTGCTCGGTACCTTCCTGG TCCGTTCCGGCGTGCTGGTCTCGGTACATGCTTTCGCCTCCGATCCGGCGCGCGGCATGTTTATTCTCGCATTTTTGGTC ATCGTGATTGGCAGCTCGCTGCTGCTGTATGCCATTAAAGGCGGCCAGGTGCGCAGTCGGGTGCAAAATGAGCTCTGGTC GCGAGAATCTTTTCTGCTGGGGAATAACGTCCTGTTAATCGCGGCCATGCTGGTGGTCCTGCTCGGCACGCTGTTACCGC TGGTGCATAAACAGTTAGGACTGGGCAGCATTTCGGTAGGCGAACCCTTCTTTAATACCATGTTCAGTTGGCTGATGGCT CCGCTGGCGTTAATGCTCGGTATTGGGCCGTTAGTGCGCTGGCGACGCGATGAGCCACAAAAGCTGGTTCGTCGTCTGCT GATAGCGCTGCTCGTGACGCTGCTGGCCTCCGTGCTGCTGCCCTGGTGGTTGCAGGATCGTGTTGAAGCCATGACGGTGG TGGGATTACTGATGGCGGTATGGATCATCCTGTTGACCCTGATGGAGCTGCATGAGCGTGCCACTCATCGTCATCGTTTT TTTACCGGATTACGTCACCTTTCGCGCAGTCACTGGGGCATGGTGCTTGGACATCTCGGCGTGGGCGTCACCGTTATTGG CATTGCGTTCAGTACCCAATACAGCGTTGAGCGCGACGTGCGCATGAAAGCGGGCGACAGCGTCGATATCCATCACTACC ATTTTGTTTTTCGTGATGTTCAGGACTTACAAGGCCCTAATTACAGCGGCGGCGTGGCGGTCATTGACGTTTCCCGCAAG GGCAAGCCGGAAGCCGTGTTGTATGCGGAAAAACGCTTTTACTCTGCCGCGCGCACCATGATGACCGAGGCGGCGATCGA CGGCGGCTTTACCCGCGATCTTTACGCCGCGCTGGGTGAAGAGCTCAGTGACGGTAGCTGGGCGGTGCGTATCTACTACA AACCCTTCGTCCGCTGGATCTGGTTTGGCGGCTTGTTTATGGCCGTCGGAGGGCTGTTCTGTTTGCTCGACCCGCGCTAT CGCTCGCGCAAGAAAGCCGATCGCGAGGTGCGGACATGA Protein sequence : MMPELGSFLLCLGLALALLLSVYPLWGAWRLDARLMGMARPLAVGLFACVAGAFMLLVWAFIVNDFTVSYVVNNSNSLLP VYYRIAATWGAHEGSLLLWVLLLSGWTLAVAIFSRGMPQDALARVLSVMGMINLGFLLFIILTSNPFSRTLPDFPVDGRD LNPMLQDIGLIFHPPLLYMGYVGFSVAFAFAIASLMAGRLDTAWARWSRPWSTAAWLFLTIGIVLGSAWAYYELGWGGWW FWDPVENASFMPWLAGTALMHSLAVTEKRGTFKAWTVLLAITAFSLSLLGTFLVRSGVLVSVHAFASDPARGMFILAFLV IVIGSSLLLYAIKGGQVRSRVQNELWSRESFLLGNNVLLIAAMLVVLLGTLLPLVHKQLGLGSISVGEPFFNTMFSWLMA PLALMLGIGPLVRWRRDEPQKLVRRLLIALLVTLLASVLLPWWLQDRVEAMTVVGLLMAVWIILLTLMELHERATHRHRF FTGLRHLSRSHWGMVLGHLGVGVTVIGIAFSTQYSVERDVRMKAGDSVDIHHYHFVFRDVQDLQGPNYSGGVAVIDVSRK GKPEAVLYAEKRFYSAARTMMTEAAIDGGFTRDLYAALGEELSDGSWAVRIYYKPFVRWIWFGGLFMAVGGLFCLLDPRY RSRKKADREVRT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 8e-178 | 73 |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 1e-123 | 53 |
